Effector profile
| PlantPEAD ID: PlantPEAD00204 | Uniprot ID: C0LT61 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 5507 | Pathogen type: Fungi |
| Species: Fusarium oxysporum | Strain: f. sp. lycopersici strain 4287 | Other name: |
| Gene name: SIX5 | NCBI Gene ID: FJ767863 | |
| Entry name: C0LT61_FUSOX | Protein name: Secreted in the xylem 5 | |
| DOI: 10.1111/j.1574-6968.2009.01783.x. | ||
Gene/Protein information
Gene sequence:
ATGCGCTTCGAGTACATCTCTGTTCTAGCCCTTTGCGGCGCGAGTCTCGCAAGGGATCATCAGTACTGTGCTTGCCAGTCCGGTTCTGGTGACAGCATTGATATAGATGCCACCACTCAGCTTCAGAACGATAATAGTAAATCATATTTGTGGGCTCAGACCTCTCCAGCATATTGGTTTGCTGACCGTCATAAACCTGGTCCACGATTCGCTGGCATTTATCTGAAAGCTGCAAATGGCAAAATTGATGGCGATACATTCTATAATCTTTGCATTAATAATGGAGGAGCAGACTCAACATGCTTTGACTGCTCTAAATCTCACCAGGTTAGAAACGTTATCTATTGTGATGCGGCCTAG
Protein sequence:
MRFEYISVLALCGASLARDHQYCACQSGSGDSIDIDATTQLQNDNSKSYLWAQTSPAYWFADRHKPGPRFAGIYLKAANGKIDGDTFYNLCINNGGADSTCFDCSKSHQVRNVIYCDAA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 13062.5 | 119 | 5.79 | -0.348 | 25.99 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum lycopersicum | Disease name: Fusarium wilt |
| Host classification: Eudicots | NCBI Species: 4081 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: