Effector profile
| PlantPEAD ID: PlantPEAD00231 | Uniprot ID: Q3BM54 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 339 | Pathogen type: Bacteria |
| Species: Xanthomonas campestris | Strain: pv. vesicatoria strain 85-10 | Other name: |
| Gene name: AvrRxo1 | NCBI Gene ID: AM039952 | |
| Entry name: Q3BM54_XANC5 | Protein name: Putative avirulence protein AvrRxo1 | |
| DOI: 10.1111/mpp.12288 | ||
Gene/Protein information
Gene sequence:
GTGGGTGTGCGAGTCGCGGTTCGAATCGCGACTAATGTTGCAGAGTCAGTCGGACTGTATTTTCTTGGACTCTGGACATTTTTTAACATAAAAAACAAGATAGGCATTGCTGGCACAGCCGGGCTTTTTACTTCTCATGTTCCTTTCGATGACGCAGAATCCAAAGGCGTCCAAGCTGAGTCATCACAAGCGGCGCCGGAGTATAAATTCCAGACCCAGCTTGATAATTTGCCAGCTAGACCCGCTAGTTCGAAGAGCAGCAACACCACTCATGCTTATGTTCATGCATCGCCGCCGCATTCGGTGCCGATCGCAGGTGCATCGACCGCCGCGGTGACACATCAACAGGCTACTCAGCTTAAAGGCACCGATGAGTTATATGGTTTGGGCAACCTCCCATCTTCTGGTCCGGGGCGATGGGAGTATCTGGCGAATCCGGAGAACTGGCATCCGGAGCGCCGTAAGTTGCACGAAAAGCTATTAGATGAAGCACGATCTTCGGCCTTGACCCTGGCAGAATCTCTTGAGCGCGATGGCTGCCAACCGACATTGTTTGCGTTGCGCGGAAACACTGCCACGGGTAAGACGCGGATAGCCACAAAAAAAATTCCAGCTCTCGCCGCAGCTCTGGAGAAGACAGGTGGGAAAGGTTGCATCAATCCAGATGTATTCAAGAGTTCGCTTGCGAAGTCGGAGGCCGGCGCCAAGATATTTAGCTCGGCGCAAGTTCATAACGAATCATGTTTTCTTGCTGACCATTTTGAAGACGGGCTTCGCTCTCAAAGGACGGGCAGCGGTGCAATCGCTAGCATTGTTGTCGACAAGCGCTTGGCAAGGGCGTACGAAATCGACAGCTATATAGAACTAGCCAAAGAAACAGGTCGAAAAGTTGAATTGTGCGATATCGATGCACCCCTTGAGAATTCTTTGACGGGAGTTTTGCAACGGAAACCTGAAGGTGAAGATCCTAGGCCTCCTTACCCTGTAGTCTCGAGTGGATTTGTGGCCGTACGAAGCAATAGAATGAGTGTGATAGACAGGTTCATCGCCGATCCGAGCCTGGGAAACTATCGACTATTCGGAACAGCCGAGGATGGTAAGAAGGTCATGGTTGCTAGCGTCATGGGCGGTGAGTTGAGTGTAGAGGATGCTGATTTATATGAAAAGATAACGTCCCCGCAGTCCTCGGTTACCGGTGATTTGGCTGATAAGATAATCGACAATGAATTGATTGATCGTCTGACAAATAATATAGATGATCCCGAGCGCGCGGCGAATACGCGAGCCGCGCTGGAAAAATATAACGGCAAGTCGTGGTCGGCCGCGCTAGCTGCTCATAGCGAGCTAATTTGA
Protein sequence:
MGVRVAVRIATNVAESVGLYFLGLWTFFNIKNKIGIAGTAGLFTSHVPFDDAESKGVQAESSQAAPEYKFQTQLDNLPARPASSKSSNTTHAYVHASPPHSVPIAGASTAAVTHQQATQLKGTDELYGLGNLPSSGPGRWEYLANPENWHPERRKLHEKLLDEARSSALTLAESLERDGCQPTLFALRGNTATGKTRIATKKIPALAAALEKTGGKGCINPDVFKSSLAKSEAGAKIFSSAQVHNESCFLADHFEDGLRSQRTGSGAIASIVVDKRLARAYEIDSYIELAKETGRKVELCDIDAPLENSLTGVLQRKPEGEDPRPPYPVVSSGFVAVRSNRMSVIDRFIADPSLGNYRLFGTAEDGKKVMVASVMGGELSVEDADLYEKITSPQSSVTGDLADKIIDNELIDRLTNNIDDPERAANTRAALEKYNGKSWSAALAAHSELI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 48397.4 | 450 | 5.99 | -0.336 | 35.28 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Capsicum annuum, Solanum lycopersicum | Disease name: Bacterial leaf spot |
| Host classification: Eudicots | NCBI Species: 4072, 4081 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417,IPR010488
Pfam: PF06414
SMART:
KEGG: xcv:XCV4428
PRINTS: