Effector profile
| PlantPEAD ID: PlantPEAD00234 | Uniprot ID: A0FDY3 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. syringae strain 1212R | Other name: |
| Gene name: HopZ1 | NCBI Gene ID: DQ986440 | |
| Entry name: A0FDY3_PSESY | Protein name: HopZ1 | |
| DOI: 10.1371/journal.pgen.0020209; 10.1016/j.chom.2011.02.007 | ||
Gene/Protein information
Gene sequence:
ATGGGAAATGTATGCGTCGGCGGATCTCGAATGTCGCACCAGGTCTATTCGCCTGACCGTGCGGACACACCTCCTCGAAGCGAGCGCAACACTCCGGATCGCAGGCAGAGAGCGGCAGGCGACGCAGAGAGAACTCAAAGCATGCGACTGCAGCAGAAAATAAACGATTTGAAACCTTACGTGCGGCACGCACGAGGTCCAATTAAAGCTTATGGGCAAGCAGCCCTTGACCGTGCATCAGGAAAGAAGACAAGTGTGAGCTTTGCAGAGTTGGACGCCACCCATCTCGACGCAATGGTCTACATCGAGAACCAACGAAATCCCGGCCTCAACCTCAAGCACTTCAGAGACCACAAAGAGCTCATTCAGGCACTCCAAAGCGATGGCCCCAGCGCATTTCGGGCAATATTCCCACAAACCTGCCCGGAAACAGGACAGACACTCAAGCATCACGTCATGGCTGATGTACGCCTGCACCAAGGTGGCGCTCCAACCATAATAATTACAGAGCCAGCCGTTATTGTCGGTGCACGCTATCAACAACTTCAACGGCACAATCTGACCCTGGAAGATTTAAGCGAGAGCGGAGTACCCCTCTCGCAGGTCGCCATTATCGAGACACAGGCGCAAAAAACGAGCGACGATTGCGTTATGTACTCACTGCATTACGCGATCAAAGCCCATAAAAATGCAGCTCAATTTGACGACATTCATCATGGTCTTCAGCACGGCACTTTGTCGACCGAATCCGAGTCCAGGGCGCGGACCACTCTTGGCGCCCTTGAAGCAAGCAGCTCATATTCAGTGATGCATGAGGGTGCTCATGCAGCATTTGGCGCTGACGTTCTGCCGGTGGATTTTTATAAGCATGGCGCTTCGCTGACGCAGGCAAAACAGCTGATGAAGCGGCCAGATGGACGTATGGCTGGAAGAGTCGCCAGCGAAGGTCGCGGTGAGGGAGAGAACCTAGTTCAACGCAACCAGGCATTCCGCGTGAAGCGCAGGGAGCTACTCGACGATGAGACGCCGTCGAATACCCAGTGCAGCGCGTCCATCGACGGCTTAAGACTACAGGAACTCATACGAGTACTTGCCGAAGAGCAGCGCTAA
Protein sequence:
MGNVCVGGSRMSHQVYSPDRADTPPRSERNTPDRRQRAAGDAERTQSMRLQQKINDLKPYVRHARGPIKAYGQAALDRASGKKTSVSFAELDATHLDAMVYIENQRNPGLNLKHFRDHKELIQALQSDGPSAFRAIFPQTCPETGQTLKHHVMADVRLHQGGAPTIIITEPAVIVGARYQQLQRHNLTLEDLSESGVPLSQVAIIETQAQKTSDDCVMYSLHYAIKAHKNAAQFDDIHHGLQHGTLSTESESRARTTLGALEASSSYSVMHEGAHAAFGADVLPVDFYKHGASLTQAKQLMKRPDGRMAGRVASEGRGEGENLVQRNQAFRVKRRELLDDETPSNTQCSASIDGLRLQELIRVLAEEQR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40810.8 | 369 | 8.3 | -0.633 | 43.94 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Arabidopsis thaliana | Disease name: NONE |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
Q5NUF3
|
2-hydroxyisoflavanone dehydratase
|
HIDH
|
Glycine max (related: soybean)
|
MAKEIVKELLPLIRVYKDGSVERLLSSENVAASPEDPQTGVSSKDIVIADNPYVSARIFLPKSHHTNNKLPIFLYFHGGAFCVESAFSFFVHRYLNILASEANIIAISVDFRLLPHHPIPAAYEDGWTTLKWIASHANNTNTTNPEPWLLNHADFTKVYVGGETSGANIAHNLLLRAGNESLPGDLKILGGLLCCPFFWGSKPIGSEAVEGHEQSLAMKVWNFACPDAPGGIDNPWINPCVPGAPSLATLACSKLLVTITGKDEFRDRDILYHHTVEQSGWQGELQLFDAGDEEHAFQLFKPETHLAKAMIKRLASFLV
|
External Links
Interpro: IPR005083
Pfam: PF03421
SMART:
KEGG:
PRINTS: