Effector profile
| PlantPEAD ID: PlantPEAD00257 | Uniprot ID: Q8XSA6 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: GMI1000 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: RSp0572 | NCBI Gene ID: AL646053 | |
| Entry name: Q8XSA6_RALN1 | Protein name: Type III effector protein | |
| DOI: 10.1093/nar/gkab1037 | ||
Gene/Protein information
Gene sequence:
ATGCTTATACAGACACAGTACCCTGGGTTTTACATTGCAACTGCAAGTGACAATCAACGCGAAGCTGACCGTTATGCGGGCAAAGTAAACGAGGCGTTAGGGAAAATTGCGTCCGGGCGCTCGGGGGATGAACTGCTTCGCGGTATCAGCTCTCTGAGTGCGACCAGGCAGCGCAAACTGACCATCAGCGAGATCGACTCCGATGACGATCCCGGTACGGAAGCCGTCCTCACCAGGCCGCAGATTGCAGCGTACGAGCCATCGGATTTTCGAGCCAACAAGAGAATCGCCAAACAGTTCGCGAGAGGAGAAGTCTCTTCGGAACCTGCCGGCTGCAGCGCGATCGTGAACTGGAACCCCAAGACCAGCATCAAGCTGAGCCGAAACGGCTCGCCGAAGCGCCTGCATAAAGACCCCAAAGAATCGTTCGCTGTCCTCGCCCATGAACTGATCCATGCCCGCCACGTCATGGCAGGTACATCCAAAGCCTGGAGCGGCGACCGTTACAACGAAACCAGCGAGGCAGGCCAGGAAGAGCTGAGGGCGGTTGGCTTGGGGGCCTACGCACACGCCTACACCGGTGAACCGACGGAAAACTCCATCCGTGCGGAACAGGGCTTGCAGGCACGCAGCAAGTACAAGCCACGCAACGCATAA
Protein sequence:
MLIQTQYPGFYIATASDNQREADRYAGKVNEALGKIASGRSGDELLRGISSLSATRQRKLTISEIDSDDDPGTEAVLTRPQIAAYEPSDFRANKRIAKQFARGEVSSEPAGCSAIVNWNPKTSIKLSRNGSPKRLHKDPKESFAVLAHELIHARHVMAGTSKAWSGDRYNETSEAGQEELRAVGLGAYAHAYTGEPTENSIRAEQGLQARSKYKPRNA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23847.5 | 218 | 9.12 | -0.735 | 39.58 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR028208
Pfam: PF14891
SMART:
KEGG: rso:RSp0572
PRINTS: