Effector profile
PlantPEAD ID: PlantPEAD00261 | Uniprot ID: Q8XTS6 | Source: Database |
Localization: Apoplastic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
Species: Ralstonia solanacearum | Strain: GMI1000 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
Gene name: RSp0028 | NCBI Gene ID: AL646053 | |
Entry name: Q8XTS6_RALN1 | Protein name: Lrr-gala family type III effector protein (Gala 3) | |
DOI: 10.1093/nar/gkab1037 |
Gene/Protein information
Gene sequence:
ATGGGAAATGGTTTTTCAGTGAATCGGCACGGCCCGGTCGTGCCCCAGGATGTCGGCCCACGGTCGGCTTCAGCGGACGTGGATACGCCTGCCGCAAGTCCGGCGCATCCGGCCAGAACCGCTTCCGGTCCGTTGCTGGGGCTCCGGTCCGCGCAGGCGCAGCACGCCGTTGCGGCGGCTTCCGGTCAGGCGGCCGATGGCGAGATCGGGCCAGCAATCGGGGCGCCGGATCGTTTGCCGGAGCCACGGACGGAAATGGCTCCGCCATCCATGCGGGCCGAGCAGCACCTCCCCGCGGTGGCCGGCGATGAAGCATCGCGCACCGATGCCGAGCCGCTGAGCGGGGCGCGGAAGCTTCCGCCGGAGATGTGGACAGTGATCGCCCATCGCGATCCGGTTGCGCAGCAGCGGCTGCGCGTGGTCAGCCGTACGACGAGGGCCGCGGCGGAAGTCGGCATCCGGCAATTGATCGTCAAGACCCCGGAGGGTCTCGCGGCGGTCAAGCGCCCAGGCAGCTATCCGAACCTGCGCGAGCTGACCCTCGTCGGCAATTTCTGGGGCAATGACCTGATAGGACTGCCTGCCACGCTGCGCGAGCTGGACCTGAGCGGGTGTAGCGGCCTCAGGGTGACGGGGCTCGATCCGCTGCTTGCGCTGCCGCTGGATCAGCTGAATGTCAGCGGATGCCGGCTGGGTGCCGAGGGCGCGCGGCAACTGGCGAACCATCCGACGCTGACCTCGCTCGACATGCGCGGGAACCAGATCGGCGACGAGGGGGCGACCTACCTGGCCGACAACCCCAGGCTGACTGTGCTCGATGTCGGCGACAACCGGATCGGCGATCCGGGCGTGATCGCACTGGCCCGCAACACCGTGCTCGCCTCGCTCCATCTTGACGGCAACACGTTCGGCCTGGATGGCATCCGCGCACTGGCCAAGAGCGCCACGCTGACCACGCTGAACGTCGGCAAGAACCGGATCGGACCCGAGGGCGCGGAGGCGCTGGCCGAGCATGCCGCCCTCACGACGCTGTTGATCGAAGAGAACGCCATCGGGGATCGGGGTGCGCAGCGGCTGGCCGCCAACAAGATCCTCACCACGCTGAATGTGCGCAACAACGGCATCGGCCCTGACGGTGGACTGGCGCTGGCCGCGAGCACATCGATCGTCTCGCTTGCCATCGGCCACAACCGCATCGGGAGCGGGGCCGTGCTGGCGCTGGCTGCCAACAGGAAGCTGACCTCGCTCGATGTCGAATACACCGAGATCAGCGCCGTGGCGGATGCGGCCGATGCGCAGGCTGCAGCGGCGGCGGTTGCCGAGGTCGCTTCGGCGCTGGCTGCCAGCACCTCGCTCGTCCACCTCAACGTGGGGACGAACTGTCTTGGCGACGAAGGCGCACGGCGGCTGGCCGCCAGCAAGACGATCAAGACGCTGAACATCAGCTACAACAAGATCCGTCTCGATGGCGCGCGGGCGTTGGCCGCCAACAGAATGATCGCCTCGCTCGATCTGGCCGGGAACGTCATCGGGACACCAGGTGTAAAAGCGCTGGCCGCCAACACGGCGCTTGCCACGCTGAATCTCCGCCAATCCCAGATCGAGCCCGAGGGGGTGGTGGCATTGGCGGCCAACAAGACGCTCGCCTCGTTGGACGTGGGTGCCAACAAGCTGGACCCCGACAGCTTGCGCATGCTGCTCACGCAGATGAACCTGGCCGTGCTCGATGCCACCTTCAGTGGCTGTGAACCGGGCGCCGGAGCCGAGTTGACGGCGCTGGCGGCCCGCATCGGCGTGACGCTGCGGATTTGA
Protein sequence:
MGNGFSVNRHGPVVPQDVGPRSASADVDTPAASPAHPARTASGPLLGLRSAQAQHAVAAASGQAADGEIGPAIGAPDRLPEPRTEMAPPSMRAEQHLPAVAGDEASRTDAEPLSGARKLPPEMWTVIAHRDPVAQQRLRVVSRTTRAAAEVGIRQLIVKTPEGLAAVKRPGSYPNLRELTLVGNFWGNDLIGLPATLRELDLSGCSGLRVTGLDPLLALPLDQLNVSGCRLGAEGARQLANHPTLTSLDMRGNQIGDEGATYLADNPRLTVLDVGDNRIGDPGVIALARNTVLASLHLDGNTFGLDGIRALAKSATLTTLNVGKNRIGPEGAEALAEHAALTTLLIEENAIGDRGAQRLAANKILTTLNVRNNGIGPDGGLALAASTSIVSLAIGHNRIGSGAVLALAANRKLTSLDVEYTEISAVADAADAQAAAAAVAEVASALAASTSLVHLNVGTNCLGDEGARRLAASKTIKTLNISYNKIRLDGARALAANRMIASLDLAGNVIGTPGVKALAANTALATLNLRQSQIEPEGVVALAANKTLASLDVGANKLDPDSLRMLLTQMNLAVLDATFSGCEPGAGAELTALAARIGVTLRI
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
61819.3 | 603 | 6.24 | 0.049 | 25.86 |
Plant infestation information
Experimental plant: | |
Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR001611,IPR032675,IPR027038
Pfam: PF13516
SMART: SM00368
KEGG: rso:RSp0028
PRINTS: