Effector profile
PlantPEAD ID: PlantPEAD00262 Uniprot ID: Q8XYF8 Source: Database
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 305 Pathogen type: Bacteria
Species: Ralstonia solanacearum Strain: GMI1000 Other name: Ralstonia nicotianae, Pseudomonas solanacearum
Gene name: RSc1800 NCBI Gene ID: AL646052
Entry name: Q8XYF8_RALN1 Protein name: Probable lrr-gala family type III effector protein (Gala 4)
DOI: 10.1093/nar/gkab1037
Gene/Protein information
Gene sequence:
ATGGGATACCACTTCTGGGCCGGCTGGCGGCCAACGTCCGTCGCCGACAGCGCGCAGGCTTCGACATCGGCACCGCAGGCGGGCGCGCCTGCGTCCCAGCCGGCAAGGCCGGCCCGGGCGCCGGCTGGGTCATCGATCCTGCGGGGCCTGGCGCGCCTGCGGGCGCGGTGGGTGGCACCGCCGGTGCCATTCTTTCCACCGGAGATCTGGACGGAAATCGCGCGCGGCACCAAGCCCGCGGACATGCAAAGCCTGCGCGCCGTCAGCCGGGCGGTGAAGATGGGCGCCGAGGCCAGCATCCCGCAACTGACCATCACGCACCGGGACAGCGGCAAAAGGCCGCCGTCCGTGGCCGGTTGCCTGGAGCTGAATCGGCTGACGCTCGTCGGCCATTTCACGGATGCCTACCTGCAGAGGTTGCCGGCTTCCCTCACGGCGCTGGACCTGAGCCGATGCGAGGGCCCGATCACGTCCGCCGGGATCGCCCGCCTGCTGGCGCTGCCGCTGGAACGGCTGGATGTCAGCGGCTGCGGGCTGGATGCCGAAAGCGCGCGGCTGCTGGCGAGCCACCCGACGCTGACCGTGCTCAACATCTCCCGCAACGCGATCGGCGACGACGGTGCCGCTGCCTTGGCGGCCAACCCGAAGCTGACCTCGCTCAATGTCGGCCGCAACGGGATCAGTGACGCCGGCGCGCGCGCGTTGGTTGCCTGCGCCGGGCTGACCAAGCTCGATATCAGCGACAACAGGATCGGCGATGCGGGCGCGCGGGCGCTGGCCGGCAGCGCCAAGCTGAACAAACTCGATGCCGGCGACTGCGGGATCGGCCCCGAGGGCGCTCGGGCACTGGCCGCCAGCCAGACGCTCACCCGACTGGACCTGCGCTACAACGAGATCGGGGTCGGGGGGGCCGAGGCGCTGGCCGCGAATCCCCGGCTCACCAGCCTCAACGTCTGCGGCAATGCGCTGGGGAGCGCGGGCGCGGCGCTGCTGGCAGCCAGTGCCGCGCTCACCGAGCTCGACATCGGCAACAACGGCATCGGCAACGCGGGGGCGCGGGCCCTCGGCGCCAATGCCACGCTCGTCAAGCTGAGTGTCGCCAACAACGGCATCGAGGAGGCAGGGGCGCGAGCGCTGGCGGCCAGCACCACGCTCACCGCGCTGGACATCGGCAGCAACCGGATCGGGGATGCCGGTGCGCAGGCCCTGGCTGCCAACGATACGCTCGTCACCCTGGATGCCAGCGCCAACTGGATCGGAGACCCGGGCGCGCTGGCGCTGGCCGACAACACCCGGCTGGCCACGCTCAATGTCGGCGCCAACCGGATCGGCGAAGCGGGCATGCGGGCACTGGAGGCCAGCACCACGCTGGCCGTGCTCAAGACGTGA
Protein sequence:
MGYHFWAGWRPTSVADSAQASTSAPQAGAPASQPARPARAPAGSSILRGLARLRARWVAPPVPFFPPEIWTEIARGTKPADMQSLRAVSRAVKMGAEASIPQLTITHRDSGKRPPSVAGCLELNRLTLVGHFTDAYLQRLPASLTALDLSRCEGPITSAGIARLLALPLERLDVSGCGLDAESARLLASHPTLTVLNISRNAIGDDGAAALAANPKLTSLNVGRNGISDAGARALVACAGLTKLDISDNRIGDAGARALAGSAKLNKLDAGDCGIGPEGARALAASQTLTRLDLRYNEIGVGGAEALAANPRLTSLNVCGNALGSAGAALLAASAALTELDIGNNGIGNAGARALGANATLVKLSVANNGIEEAGARALAASTTLTALDIGSNRIGDAGAQALAANDTLVTLDASANWIGDPGALALADNTRLATLNVGANRIGEAGMRALEASTTLAVLKT
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
46668 462 8.79 0.107 27.74
Plant infestation information
Experimental plant:
Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum Disease name: Bacterial wilt
Host classification: Eudicots NCBI Species: 4111, 4081, 4113
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.