Effector profile
PlantPEAD ID: PlantPEAD00271 Uniprot ID: Q8XVQ5 Source: Article
Localization: Apoplastic(Exp) Pathogen taxonomy ID: 305 Pathogen type: Bacteria
Species: Ralstonia solanacearum Strain: GMI1000 Other name: Ralstonia nicotianae, Pseudomonas solanacearum
Gene name: PopW NCBI Gene ID: AL646052
Entry name: Q8XVQ5_RALN1 Protein name: Pectate lyase
DOI: 10.1111/J.1364-3703.2010.00610.X
Gene/Protein information
Gene sequence:
ATGTCCATCCAGATTGATCGCCCGAACAACCATTTCCAGACGCCCTCGACGTGGAATCACGATGCGGGTTCCAGTATCGATACCAGCCAGCTCCAGCGCGCAGTACAACTGCTCGACCAGGTCTTGCAGCAGCTCGAAGCGCGCAAGCTGTTCGGGAACATGCTGAACCAGCCGGGCGCCGACAACGCCGGCCAGAACCACGCTGGCGGCCACGGCGGCGGTCATCATGGCGGCTCGAACGGGTTCGGTGAAAACGGCCGCTTCGGTTCGCCGCACGCCAATTCGCCTGCGCAGCCGGACCTCGAACTGCCGGCCAACAAGCCCAACAACGGCAAGCACAACACTTCGGCTTCCACGCCGGACACGCAGACGGCGCCGTCTTCCACTTCGCCCACGACCGGCACGTCCCCGACGCCCACGTCCACCTCCGCGACCGAGGGCAAGGTGGCCTACGGCGTCAAGCCGCCCGAGCCGACCGGCGTGGTCGACGTCAGCAAGCCGATCGTCGTCAAGGCTGGCGAGACGTTCGACGGCGGCGGCAAGTACTACCGCCCGACCAAGGAGATGGGCGACGGTTCGCAGAACGAGCACCAGAAGCCGCTGTTCATTCTGGAGCCCGGCGCGACGCTCAAGAACGTGCAGTATTCCGGCGGCGACGGCATCCACCTGCTGGGCAGTGCCAAGCTGGACCGCGTCGTGAACCGCCAAGTGGGCGAAGATGCCATCACCATCGATGGCGCCAAGAACCGCGCGCATGATGCCAAGATCGCCGGGATCGATCCGGCGTCGATCCCCGGAGGAACGCCCAAAGTGGAGATCACCAACAGCGCCTTCTATGGCGCCAAGGACAAGCTCGCTCAGATCAACGGCGACGTTGACCTGCAGGTGAAAGGCATGTATGTCAACGGCGCTGGCAAGGTCTTCCGTACCAACGGTGGTGATACGCAGATCAAGGCGACGGTCAACGTCCAGGATTCGAATTTCCAGAACGTGTCGGAGGCGGTTTTCCGGACCGATTCCAAGTTCTCGACTGCGTCGTTCTCGGACGATGTGAAATCGGATGCGCCCTTCGATGGACTGGCTCCCGACAAGAGCCAAGTCACAGGCACCAACAAGGTGAGCTACAAGGCCTACTCGGGCTGA
Protein sequence:
MSIQIDRPNNHFQTPSTWNHDAGSSIDTSQLQRAVQLLDQVLQQLEARKLFGNMLNQPGADNAGQNHAGGHGGGHHGGSNGFGENGRFGSPHANSPAQPDLELPANKPNNGKHNTSASTPDTQTAPSSTSPTTGTSPTPTSTSATEGKVAYGVKPPEPTGVVDVSKPIVVKAGETFDGGGKYYRPTKEMGDGSQNEHQKPLFILEPGATLKNVQYSGGDGIHLLGSAKLDRVVNRQVGEDAITIDGAKNRAHDAKIAGIDPASIPGGTPKVEITNSAFYGAKDKLAQINGDVDLQVKGMYVNGAGKVFRTNGGDTQIKATVNVQDSNFQNVSEAVFRTDSKFSTASFSDDVKSDAPFDGLAPDKSQVTGTNKVSYKAYSG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
39809.6 380 6.26 -0.684 22.38
Plant infestation information
Experimental plant: Solanum lycopersicum (related: tomato)
Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum Disease name: Bacterial wilt
Host classification: Eudicots NCBI Species: 4111, 4081, 4113
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.