Effector profile
PlantPEAD ID: PlantPEAD00278 Uniprot ID: Q8XRE0 Source: Database
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 305 Pathogen type: Bacteria
Species: Ralstonia solanacearum Strain: GMI1000 Other name: Ralstonia nicotianae, Pseudomonas solanacearum
Gene name: RipG1 NCBI Gene ID: AL646053
Entry name: Q8XRE0_RALN1 Protein name: Lrr-gala family type III effector protein (Gala 1)
DOI: 10.1093/nar/gkab1037
Gene/Protein information
Gene sequence:
ATGGGAAACCAGTTTTCGATCAACCGGAACCGTCCGGCCAACGCCGGCGAAGCGCATGCCTCGTCGACCGAAGCGAAGCCCGCGCCGGATGCCGCCAGCCCATCGCGTCAGGTGAGGGTCGCCACTGCCCCGTCAATACTGGAGGGCCTGAGAAAGCTGCGATTGCCTTTCAACTTCGGGGCGAGGGTGCCGCCGCTCCCGGAGGAAACATGGGCCGAGATCGCTCGCCGTGTCGATACCAAGACCTTGCACAGGATGCGCGCCGTCAGCAAGACCCTGAAGGCGGCGGCAGACACCGAGATCCGGCAACTGACCGTCAACACCGTGGAGGCCCTCCAGGCGGCGAAGCGTTACGCTTGCCTGGAAACACTGAAGATGGACGGCTATTTCGGCGACGCAGACCTGGAAGGGTTGCCGGCGTCCCTGAGGGAGCTGGATCTGTTCTCGACCCGCTACGTCTCGGCCAAAGGGCTCGCCCATCTGAGCAAGCTGCCGCTTGTGCGCCTGAAAGTCAGGGCCAACGGAATCCATGCGGAGGCAGCGCGGGCACTGGCTGCCAGCACGACGCTCACCGCCCTCGACATCCGCGGCAACGGGATCGGTGACGCAGGTGCGCAGGCGCTGGCCGCCAATACCTCGATCACGTCGCTCGACGCCAGCTTCAACGACATCGGCGTGGCGGGCGCCCGGGCGCTGGCCGCCAACACGACGCTCACCTCGCTCGATCTCGGCTTCAACGCCATCGGCGATGAGGGGCTGCAAGCACTGGCCACCAACACCTCGCTCACCTCGCTGACCGTCGGGTCATGCGAGATCGGCGATGCGGGAGCGGCCGCGCTGGCCAACAACACGGCGCTGACTTCGGTCGACCTCACGTGCAACCACATCGGCGAGGAGGGGGCGGAAGGGCTGGCTGCCAACACTGTGCTGACTTCGCTCGACCTCACGCGCAACAGCATCAGCGACAGGGGGGCGGCAGCGCTGGCCGGCAACACGACGCTGACTTCACTGTGCGTCAACTTCAACGACATCTATGGAAGGGGGGCGCGTTGGCTGGCCGAGAACACCACGCTCACCACGCTGGATATCAGCTACAACCCGATCGGTGATTGGGGCGCACTCGGCCTGGCCGACAATATGACACTCCGTTCGCTCAGCGTCGTCGCCGGTCGGATCGGCGTTGAAGGCGCGCGAGCGCTGGCCGGCAACACGACATTGACCACGCTGGATATCAGCGTGAATGCGATCGGCAATGAAGGCGCGCAGGCGCTTGCCGCTAACGCCACACTCACCACACTGAGCCTCCGGAGCTGCGAGCTCCGGGCCGCCGCCGCGGAAGCATTCAAGGCGAACACCACGCTGGCCTCGCTCGACATCGGCGAGAATCGCATCGAGGCTGCGGGCGCGCAAGCACTGGCCGACAACACTGCGCTCACCACGCTCCGCGTCACCGGCAATCAGATCGGTATGGCGGGCGCGCAAGCACTGGCTGCCAATCGCAGCCTGACCAAGCTCAATATCAGCCAGAATGACATCCGGTCCGCGGGCGCGCAGGCACTGGCTGCCAACACCTCGCTCACCTCACTGGATGTCAGCAGCGCCTCGATCGGCGCGGCGGGTGCGCAAGCGCTGGCCGCCAACACCTCGATCACCTGGCTCAACATCAACGACAATCACATCGGCGATGCGGGCGCGCAGGCGCTGGCCGCCCACCCGGCACTCACCTCGCTCTACGCCTGCGACAATTTCATCGGTACCGCGGGCGTGCAAGCGCTGGCCGCCAATACCAGGCTGACCTCGCTCAGCATCTGGGGCAATCGGATCGGCGATGCGGGCGTGAAAGCGCTGGCCGCCAACACCACGCTCACCAAGCTCACCATCGGCAAGCGGGTCGACAAGCAGCTCGGCGAACAGATCGGAGACCTGGCATGGCAAGAGTTGATGGCATCGGTTGACCGGAGCGGCATGACGTTCCATTCCCTGTAG
Protein sequence:
MGNQFSINRNRPANAGEAHASSTEAKPAPDAASPSRQVRVATAPSILEGLRKLRLPFNFGARVPPLPEETWAEIARRVDTKTLHRMRAVSKTLKAAADTEIRQLTVNTVEALQAAKRYACLETLKMDGYFGDADLEGLPASLRELDLFSTRYVSAKGLAHLSKLPLVRLKVRANGIHAEAARALAASTTLTALDIRGNGIGDAGAQALAANTSITSLDASFNDIGVAGARALAANTTLTSLDLGFNAIGDEGLQALATNTSLTSLTVGSCEIGDAGAAALANNTALTSVDLTCNHIGEEGAEGLAANTVLTSLDLTRNSISDRGAAALAGNTTLTSLCVNFNDIYGRGARWLAENTTLTTLDISYNPIGDWGALGLADNMTLRSLSVVAGRIGVEGARALAGNTTLTTLDISVNAIGNEGAQALAANATLTTLSLRSCELRAAAAEAFKANTTLASLDIGENRIEAAGAQALADNTALTTLRVTGNQIGMAGAQALAANRSLTKLNISQNDIRSAGAQALAANTSLTSLDVSSASIGAAGAQALAANTSITWLNINDNHIGDAGAQALAAHPALTSLYACDNFIGTAGVQALAANTRLTSLSIWGNRIGDAGVKALAANTTLTKLTIGKRVDKQLGEQIGDLAWQELMASVDRSGMTFHSL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
68044.6 661 5.85 0.057 24.39
Plant infestation information
Experimental plant:
Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum Disease name: Bacterial wilt
Host classification: Eudicots NCBI Species: 4111, 4081, 4113
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q39255
SKP1-like protein 1A
SKP1A
Arabidopsis thaliana (related: thale cress)
MSAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE
Q9FHW7
SKP1-like protein 1B
SKP1B
Arabidopsis thaliana (related: thale cress)
MSTVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNGIPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
O49484
SKP1-like protein 11
ASK11
Arabidopsis thaliana (related: thale cress)
MSSKMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHHVDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWAFE
Q9M1X5
SKP1-like protein 13
ASK13
Arabidopsis thaliana (related: thale cress)
MSKMVMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANGVPIANVTGVILSKVIEYCKKHVVSDSPTEESKDELKKWDAEFMKALEQSSTLFDVMLAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWAFE
O81057
SKP1-like protein 14
ASK14
Arabidopsis thaliana (related: thale cress)
MSSNKIVLSSSDGESFEVEEAVARKLKIVEHMIEDDCVVTEVPLQNVTGKILSIVVEYCKKHVVDEESDEFKTWDEEFMKKFDQPTVFQLLLAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWAFE
O81055
SKP1-like protein 16
ASK16
Arabidopsis thaliana (related: thale cress)
MSSNKIVLTSSDDESFEVEEAVARKLKVIAHMIDDDCADKAIPLENVTGNILALVIEYCKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFDMETVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKENAWAFEDLK
Q9LNT9
SKP1-like protein 4
ASK4
Arabidopsis thaliana (related: thale cress)
MAETKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNGIPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE