Effector profile
| PlantPEAD ID: PlantPEAD00286 | Uniprot ID: A0A0M5K865 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 67593 | Pathogen type: Oomycota |
| Species: Phytophthora sojae | Strain: race 2 strain P6497 | Other name: Phytophthora megasperma f. sp. glycines |
| Gene name: PsCRN108 | NCBI Gene ID: KT726855 | |
| Entry name: CR108_PHYSO | Protein name: Crinkler effector protein 108 | |
| DOI: 10.1371/journal.ppat.1005348 | ||
Gene/Protein information
Gene sequence:
ATGGTGAAGCTCTACTGTGCGGTCGTAGGTGTGGCAGGCAGCGCGTTCTCGGTGCGAGTAGATGAGAGCGACACGGTGGACGACTTGAAGGACGCGATCAAGGCGAAGAAGCCGAACGACTTCAAGGACATCGACGCAGACAAGCTGGAGCTCTACGTGGCGAAGAGGGATGGTGTGTGGCTGACGGAGGCAGACGTGAAGAGCGGCGTAGCGGACATCACGGGCCTCGTGCGGTTGGAAGTGGTGCGGGCGAAGCTATTTAGTGTGGGGCTGTCGGATGAAGTTGTCAGCGAAGTGGATGCCCAAGAAGAAGCAGCAGGGAGAGGCCCGGTGAACGTGCTGGTGGTGGTTCCGATGAAAAAGCGCAGAGTGGATGCGGGAGTGGACGAGGAGAGGAGATTTTTCGACACGAGAGACTTCCCTCCGCTGCTGGCGCCGCCACAGCGTGGCGCGACTGTGGAATCACCAGAGGCGCAGTGGGAGAAGTTGTTGAATTCGCTGGAGTGGAAGGAGCCAAAGCGACTTTGCGCAAGTTCTGGACAGAATTGGCCATATCAAGGGGAATCAGAGCTTGCGGGTCATCTTGTGGAGCCGCTTGCACTGCATTATACTGCCTGGTATCTCCAGAACGAGGACAAGCAGAATCACGCCATCAACCTAGTGCTGAGTGGACCAGGCACGGGAAAGTCGCGCATGCTGGATCAAATGAAGGGCTTGATGTGTGCAGCTGCTGCCCGCTCGAACAACCGAAAGCTCAAAGAGAGAATGGAGAACGCATTTGTGTTTAGTGTGACGTTCGAAAATGGCACCTCGGCGACTGGATCATTACTTGATCGTGACAATCCTGAGTTCGACATCAGCTACCGAATGCTCTACCAACTCTCAAAGGATCGGCCAAACTGGAAGAAGTTTGCCAAGACGTTGAAGTCATATCGATCTCTGGAACTCGATATTGAGGCGGCAATTGGCATTTTGGCCAAACTGAAAGGGATTGACGATGTGAAGAAAATGACGGTGATTTTGTGTGTCGATGGCCTCCAGAAGCTGGTCAATGATGGTACCAAAAGCTGCGACTTCTACCGCGTGTTGGCTTCAGTCTGCAGCTTCTTGAATTCGTCCAGAGCGTTTGCTGTTTGTGTTTGTTCGGCAACCATTCAAAGTCCCGTCGATAAGGCACTTTCGGACTCTCCTCAGAAGCGCGTGTTTCTAGTCCCACCTCCATTACGTGGCCACGAAGTCCTGCCAACGAAGACAAGGATCGAGAAGCAGTTGGTAGACGACATGGGTGGGCATGGACGAGCTCTGGAAACACTACAACTCTTTCTGAGCCACTACACGAAAGACCAATTGGAGGAAATGGACCCAACATGGATGTTTGAGAAAGTGTGCGATGCGTTGCGACTCCAATATGGTGATATCTTTGCGTCTCCGTTTTTCCAAGATCCGTACAATTGCCGAGAAGTGCTCGCCGCAATCCTCTCTCGTCGTCGTTATAAGCTGTTTGATCGTATTGGGCGCACGGACATGACCGTAGATTGTCTTCGAAGCTTCGGATTGTTCCGATGGGGCGCGGAAGGCCATTTGGAATGCGCTTTCATTCTTCTTGTGCTGCTGATGCAGAAACTCCCGAAGAAGCTCGGTGAAGTAGATAATTTCGACGACCATCTCACGCGTACGGTTTTGGTATGGCAGCGATTTGAACAATTCGTGGCGTTTTACCGTCGAGTGAAATCGATCGCCTACTGCGAGACTCCGGTCGCACTGTCCAGTTTCCACGCTGGCGCTCGTTTTGGTGCTATCCAAGACATTATTATAACAGAGCCGACTTCACGCACTGTCGTGGAAGCACTGCGCCAAGAAGATACAAAATCCAGTTCCGATGATTCGACGTGCTTCACAAATCGTGATGGCGGCGTGAAGATTTCAGATATGGATACGATCGTCATCAACGGTGCTAGTGCTTCAGCTGGCGACTTATTTATGCGAGTTCAATTGAAGGTCGGTCGTCAAAACGTCCAATGCAACGAAGTGATTCAATGCAAGCTGCTTCAAACCAAGCAGAAGATACACGAAGACGCGTATGCCAAAGAACGAGCTAAAGCGGCAAACGAAAGCTCGGATGTGTTTTTGCTCGTTACGCCAGCACAAGCGACAGAGTTTGATCTTCCTCCACGATGTGGACTTGTTTCAGCAAACGAGTTTGGCCGATATTTTGGACCGTTTACAAGTCGCGCGTATCGGAGTTTTCTGGAGCCACCAAATATCAACACAGCTTCATTCCATGAGTTACGTCGACTCGAGGGCGTGGGTGACGCAACTGCCGCGAAGATTATCGCTGAGAGAACGATACGCCGATTCTCGAATCTCGAAGATGCATTGAATCGACTGGTTCCAAGCAAGAAAGGCAAGACCGCCATGATTCTGAGCCGCATGCATTACGATGACGATGAGGCTGATCTGTAA
Protein sequence:
MVKLYCAVVGVAGSAFSVRVDESDTVDDLKDAIKAKKPNDFKDIDADKLELYVAKRDGVWLTEADVKSGVADITGLVRLEVVRAKLFSVGLSDEVVSEVDAQEEAAGRGPVNVLVVVPMKKRRVDAGVDEERRFFDTRDFPPLLAPPQRGATVESPEAQWEKLLNSLEWKEPKRLCASSGQNWPYQGESELAGHLVEPLALHYTAWYLQNEDKQNHAINLVLSGPGTGKSRMLDQMKGLMCAAAARSNNRKLKERMENAFVFSVTFENGTSATGSLLDRDNPEFDISYRMLYQLSKDRPNWKKFAKTLKSYRSLELDIEAAIGILAKLKGIDDVKKMTVILCVDGLQKLVNDGTKSCDFYRVLASVCSFLNSSRAFAVCVCSATIQSPVDKALSDSPQKRVFLVPPPLRGHEVLPTKTRIEKQLVDDMGGHGRALETLQLFLSHYTKDQLEEMDPTWMFEKVCDALRLQYGDIFASPFFQDPYNCREVLAAILSRRRYKLFDRIGRTDMTVDCLRSFGLFRWGAEGHLECAFILLVLLMQKLPKKLGEVDNFDDHLTRTVLVWQRFEQFVAFYRRVKSIAYCETPVALSSFHAGARFGAIQDIIITEPTSRTVVEALRQEDTKSSSDDSTCFTNRDGGVKISDMDTIVINGASASAGDLFMRVQLKVGRQNVQCNEVIQCKLLQTKQKIHEDAYAKERAKAANESSDVFLLVTPAQATEFDLPPRCGLVSANEFGRYFGPFTSRAYRSFLEPPNINTASFHELRRLEGVGDATAAKIIAERTIRRFSNLEDALNRLVPSKKGKTAMILSRMHYDDDEADL
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 91945.2 | 820 | 6.52 | -0.275 | 38.54 |
Plant infestation information
| Experimental plant: Glycine max (related: soybean) | |
| Susceptible plant: Glycine max | Disease name: Root and stem rot of soybean |
| Host classification: Eudicots | NCBI Species: 3847 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
A0AA49XXI4
|
Calmodulin-binding transcription activator 2-like
|
NbCAMTA2
|
Nicotiana tabacum (related: common tobacco)
|
MADSRRYGLNAQLDIDQILLEAQHRWLRPAEICEILKNYQKFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHSWRKKKDGKTVKEAHERLKAGSIDVLHCYYAHGEENEHFQRRSYWMLEEEMSHIVLVHYREVKGTRTNFSRTREPQEATPRSQETDEDVHSSEVDSSASTKFYPNDYQVSSQVTDATSLSSAQASGYEDAESAYNQHPTSGFHSFLDAQPSMMQKAGESLPVPYHPIPFSNDHQVQFAGSSDMDFFSSAPGNKSGNTANMYIPSRNLDFPSWETISVNNPAAYQSYHFQPSSQSGANNMTHEQGSTTTGQVFLNDFKKQGQNRIDGLGDWQTSEGDAAFISKWSMDQKLNLNLASDHTIRSSAAYNVELHNSLEASHILPSHQEKHPMQNELPSQHSDANVGGSLNAELDHNLSIGVRTDHSSLKQPLLDGVLREGLKKLDSFDRWMSKELEDVSEPHMQSNSSSYWDNVGDDEGVDNSTIASQVQLDTYMLSPSLSQDQFFSIIDFSPSWAFAGSEIKVLITGKFLKSQPEVEKWACMFGELEVPAEVIADGVLRCHTPNQKAGRVPFYITCSNRLACSEVREFEFRVSESQDVDVANSCSSSESLLHMRFGKLLSLESTVSPSSPPRSEDDVSHVCSKINSLLKEDDNEWEEMLNLTYENNFMAEKVKDQLLQKLLKEKLRVWLLQKVAEGGKGPNVLDEGGQGVLHFAAALGYDWAIPPTIATGVSVNFRDVNGWTALHWAASYGRERTVGFLISLGAAPGALTDPTPKHPSGRTPADLASSNGHKGIAGYLAESSLSSHLSSLELKEMKQGENVQPFGEAVQTVSERSATPAWDGDWPHGVSLKDSLAAVRNATQAAARIHQVFRVQSFQRKQLKEHGGSEFGLSDEHALSLLALKTNKAGQHDEPVHTAAVRIQNKFRSWKGRRDYLLIRQRIIKIQAHVRGHQVRNKYKNIIWSVGILEKVILRWRRKGSGLRGFKPEATLTEGSNTQDRPVQEDDYDFLKEGRKQTEQRLQKALARVKSMVQYPEARDQYRRLLNVVSDMKDTTTSSDGAPSNSGEAADFGDDLIDLDDLLDDDTFMSTAP
|
External Links
Interpro: IPR045379,IPR010994
Pfam: PF20147,PF12836
SMART:
KEGG:
PRINTS: