Effector profile
| PlantPEAD ID: PlantPEAD00287 | Uniprot ID: A0A0A0S3X0 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 5022 | Pathogen type: Fungi |
| Species: Leptosphaeria maculans | Strain: 00-100，Ar5 | Other name: Phoma lingam |
| Gene name: AvrLm2 | NCBI Gene ID: KM073975 | |
| Entry name: A0A0A0S3X0_LEPMC | Protein name: Avirulence protein | |
| DOI: 10.1111/mpp.12228 | ||
Gene/Protein information
Gene sequence:
ATGCGGCTAGCCAATTTTCTTTTTTACCTTGCGCCAATGATTGTCAGTTCATTGGCCTTCGACTTCGTTCCTCTATCAGGCGAACTCGATTTCTCCCAGGAAATGGTCTTTATCAACCTTACCCAGCAACAATTTTCGGAACTCCACCTACAACATCAACAATGGCATCAGAAAAACATTCTTAAACGCTACACCCTCACTGAATTGGACGAGATTTGCCAGCAATACAATGCAAACTTTCGCTTCAACAGTGGATTTTGCTCGGGAAAAGACAGAAGGTGGGATTGCTACGATCTTAACTTTCCGACTACGCAAAGTGAACGCAGGGTTCAAAGGCGGAGAGTTTGCCGCGGCGAACACCAAACGTGTGAAACCATCGACGTCATCAATGCGTTCGGTGCCCACGCCCGATTCCCTCAGTGCGTTCACAGATTCGAACTACCGATCAACGATCCCATCCCATACAAGGATTCTTACCAGGGCCAATACACAGTTGAAAAGGCGTTAGATGACTCCTGGGAAGACATTCTCGCGAACACTGGTGGTAGTCACGTGGACTTCAGCTACCAATCAGGCACTCAACACTACCAAGGCTACGGACTCACTTTTGCATGCATACATTGTATTGGAGGATCCATACTTAGAATGATCCATGCAAACGATCCAGCAAGGGCCACAGTTACTATCAAATTTCACTAA
Protein sequence:
MRLANFLFYLAPMIVSSLAFDFVPLSGELDFSQEMVFINLTQQQFSELHLQHQQWHQKNILKRYTLTELDEICQQYNANFRFNSGFCSGKDRRWDCYDLNFPTTQSERRVQRRRVCRGEHQTCETIDVINAFGAHARFPQCVHRFELPINDPIPYKDSYQGQYTVEKALDDSWEDILANTGGSHVDFSYQSGTQHYQGYGLTFACIHCIGGSILRMIHANDPARATVTIKFH
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 26990.4 | 232 | 6.24 | -0.434 | 47.59 |
Plant infestation information
| Experimental plant: Brassica napus (related: rape) | |
| Susceptible plant: Brassica napus | Disease name: Phoma stem canker |
| Host classification: Eudicots | NCBI Species: 3708 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: