Effector profile
PlantPEAD ID: PlantPEAD00288 Uniprot ID: V5TFR9 Source: Article
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 5022 Pathogen type: Fungi
Species: Leptosphaeria maculans Strain: strain v23.1.3 Other name: Phoma lingam
Gene name: AvrLmJ1 NCBI Gene ID: KF853561
Entry name: V5TFR9_LEPMC Protein name: Avirulence protein LmJ1
DOI: 10.1111/mpp.12356
Gene/Protein information
Gene sequence:
ATGCTCTATTTCCTAATCTACTTAAAACTCCTTCTCTTCACCATCTGTGCACTTGCACACGACTGCCATCAGGTCACCGTTTCTCGAGACGTTACACTACAGAACAAAGAACGGCACGACTGCAACCAAGTATGCGCGTCTATCGACAAAGAAACCGAAAACAAACTCAACACGGACATTATACCACGTCTCACTCGTTATATGTCCGTAAAGGGCAATTCTATAATCGCACGAGTACAACAAAGCAATTCCGATCCTAAGTGCAGCTGCACTTGGAGGGCTATTATATGGCGGGTGTATAAGGCATACGATGAAAACTCCCTCAACGTCGCTCTACACGTTTCACACCCTAACCAACAGATAGGGGAAAACCCGGATTGGAGCTTAGTTATCTCTAATCCTAATGTTCATTGTCTAAAGCATTAG
Protein sequence:
MLYFLIYLKLLLFTICALAHDCHQVTVSRDVTLQNKERHDCNQVCASIDKETENKLNTDIIPRLTRYMSVKGNSIIARVQQSNSDPKCSCTWRAIIWRVYKAYDENSLNVALHVSHPNQQIGENPDWSLVISNPNVHCLKH
Protein structure:
PDB(X-ray)(7B76)
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
16264.7 141 8.18 -0.287 28.24
Plant infestation information
Experimental plant: Brassica napus (related: rape)
Susceptible plant: Brassica napus Disease name: Phoma stem canker
Host classification: Eudicots NCBI Species: 3708
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.