Effector profile
PlantPEAD ID: PlantPEAD00292 Uniprot ID: G1JUH0 Source: Article
Localization: Apoplastic(Exp) Pathogen taxonomy ID: 31243 Pathogen type: Nematoda
Species: Globodera rostochiensis Strain: Ro1-Mierenbos Other name: Golden nematode worm, Heterodera rostochiensis
Gene name: VAP1 NCBI Gene ID: AJ536826
Entry name: G1JUH0_GLORO Protein name: VAP1 protein
DOI: 10.1073/pnas. 1202867109
Gene/Protein information
Gene sequence:
CAACAAATTCGTCCATTTCAGCCATCAGAAAATCCGCTAAATTCGTTTGAAAAAAATGGCATTTGCCCCAACAATTTCTGTTCTCTGTTTGCTGCTCATTGCGCTCTCAGAAATGCCATTCTCCGTTTTGGCACTTTCTGCGTCCAGCCGCGTGTCGGTGCTCGCGTGCCACAACAACTACCGCTCAACGCTGGCCAAGGGCACCGCGGCAAACCTCACCGGTACGATGCCGGCCGGCAGCAATTTGATCCAGCAAAAGTACAGCACAAGCGCTGAGACGACAGCCCAAAACTGGGCCAACGGATGCTCAATGGCACATTCGAGCTCGTCGAGCAGAAACGGCATGGGCGAAAACTTGTACATGACCAGCTCATCGACGATCACCGAAGCGGATGCCCTGAAGCAGGCATGCGACATGTGGTGGGCGGAGTTGAAGCAGTACGGGTTTCAATCGAGTCTTATCCTGGACATGAACCAGTTCAACAAGGGCATTGGGCATTGGAGTCAGCAAGCCTGGGCCAACACGGCGCAACTTGGATGTGCCATGGCACGCTGTCCCAGCTCGACATGGAAGACTTGGGTTGTGTGCCAACTACCATGCATTGGGTAATTATCTGAACCAGGTCGTCTACAAAAANGGCACCGCGTGCAGTGGGCTGGT
Protein sequence:
MAFAPTISVLCLLLIALSEMPFSVLALSASSRVSVLACHNNYRSTLAKGTAANLTGTMPAGSNLIQQKYSTSAETTAQNWANGCSMAHSSSSSRNGMGENLYMTSSSTITEADALKQACDMWWAELKQYGFQSSLVLDMNQFNKGIGHWSQQAWANTAQLGCAMARCPSSTWKTWVVCNYNASGNYLNQVVYKKGTACSGCSDYSGASCNSTSGLCVLP
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
23347.4 219 8.28 -0.042 41.01
Plant infestation information
Experimental plant: Solanum lycopersicum (related: tomato) (non-host bioassay: yeast)
Susceptible plant: Solanum lycopersicum Disease name: Tomato leaf mold
Host classification: Eudicots NCBI Species: 4081
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.