Effector profile
PlantPEAD ID: PlantPEAD00295 Uniprot ID: Q8P4H6 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 339 Pathogen type: Bacteria
Species: Xanthomonas campestris Strain: pv. campestris strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25 Other name:
Gene name: AvrXccB NCBI Gene ID: AE008922
Entry name: Q8P4H6_XANCP Protein name: Avirulence protein
DOI: 10.1111/mpp.12435
Gene/Protein information
Gene sequence:
GTGGTGGCGGCCCAGAATCACATCCACCCCAATCTCGATGTAAAGGTCTTCGATGCGTCGGCATCCGAGCCGCATGCGTTGCGGCAAGCTATTGTCAATACCGGGCGGGGTCAGCGGTGGCGCGCCGTCGTTAACGTGGAGCGGATCCATGGAAAGGGAGCGCCAAGCCATGGCATCGCGGTGGACGTGTCGGGAGGCCGTGGCAAGGTGTCCGTCTTGGCGGTCGACAGCGTATGGGGATGCGCCGACACGCTGTCCGTCATGACCGCCGCGTTGAAGGGCGTGAAGAACGCGACGCTGACCATCCTCAACACGGGCACGCAGAAGGATGTCATCAACTGCAAGACCTTCGCCCTGGCGAATGCGAAGGCGATGGCGGATAACGATGACTTGATGGTGGATCTCCACAAGAAGAATTTTAGAGGGAAGATCGTCGGGACGGGCGATACCGTCAATGACGTGGACGTCACGATCGCGCGCGGCTCTGACGTGCTCTATGTGAGCTTCTTCCAGCACACGACGTCGAAGGACGTTTTCGACGATCTTCCCGAGCATATCCGGGAACCGCTGGAGGAGAGCTTCGACCAGAACTTCCGGGAGATCGAGGCAGGAGGCAAGCGCAGGGCGTACAACACCTCCATCCAGCAGGAGAGGCTCAAGTACCTACGGGATGCGCTGCTTTTCGCCGACGCCGAGTACTGGAGCTAA
Protein sequence:
MVAAQNHIHPNLDVKVFDASASEPHALRQAIVNTGRGQRWRAVVNVERIHGKGAPSHGIAVDVSGGRGKVSVLAVDSVWGCADTLSVMTAALKGVKNATLTILNTGTQKDVINCKTFALANAKAMADNDDLMVDLHKKNFRGKIVGTGDTVNDVDVTIARGSDVLYVSFFQHTTSKDVFDDLPEHIREPLEESFDQNFREIEAGGKRRAYNTSIQQERLKYLRDALLFADAEYWS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
25792.1 235 6.44 -0.285 21.97
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Brassica napus, Arabidopsis thaliana Disease name: Black rot
Host classification: Eudicots NCBI Species: 3708, 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
A0A178VCN9
PARP-type domain-containing protein
Arabidopsis thaliana (related: thale cress)
MPVVAEYAKSNRSSCRSCSNKIAVKSLRLGLISKGRGGVDMTRWHHFDCFPTDSESIASVDDIQGLSALEKEDQDALTKLVEQCGKVPAKKPDEKKGKAKKHIMGPKGLTKAATSSKVIADNAKSSRSSCNRCSQTIVSKDLRVGLVTEDSRGFDITRWHHLGCFPIDFHPIDSVEDIGGYSSLEKGDQMELKYLAEVNKKDKTLIDDVQKMDEGDDEAIADNELTEETKKGKHSPVAKLVEQPGEPAKEDEDEESKKPASDEISEQKTKDVKNSPDSSKVISEYAKSSRSTCKKCSQTIAAKELRLGLVTRNFRGFDMKQWHHLGCFPVDSDPIVSVEDIGGFSELQSGDQDALKELVQQCGKQTLVDKMDEDNDDTEAKIKLTEETNKRKHSEVGEMVEEDESLTKAKQQMAKTHKVNMSESTSQVEVEAEITLSASDVKDKYRDANLLPKWKAFETVIFLERDDGLNDSEKIAAFDFDGCLAKTSVKIVGADAWSLMYPSIPEKLQSLHDQGYKLVIFTNESNIDRWKNKRQAAVDSKIGRLNSFIERVKVPIQVFIACGVSSSGGKGGKDDLYRKPKAGMWQLMKKHFNSGIAIDMDKSFYVGDAAGRKMDHSDADIKFAQASGLKFFTPEEYFIPSSTSPGT