Effector profile
| PlantPEAD ID: PlantPEAD00324 | Uniprot ID: S9Q5R3 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 43 | Pathogen type: Bacteria |
| Species: Cystobacter fuscus | Strain: strain ATCC 25194 / DSM 2262 / NBRC 100088 / M29 | Other name: |
| Gene name: AvrRxo1 | NCBI Gene ID: ANAH02000066 | |
| Entry name: S9Q5R3_CYSF2 | Protein name: Putative avirulence protein AvrRxo1 | |
| DOI: 10.1093/nar/gkab1037 | ||
Gene/Protein information
Gene sequence:
GTGCTGGCCATGGTCCGCCGCCGCTCCCCCCCTCCCTACGATGATCTCTCGAAGGTGATAGCGAACAGTGGTGGCAAGCTGTCCACCACGGAAGTCTTCTCCAACCCCGCGGAGGGACACCAGGGCAGAAAGCCGAATTATGCGCAGACCGAGCGCTTCCTGCTCCAGCCGGGCAACTGGCACCCGGAGCGGGCCCAGATCCAGCAGCGGCTCGGCCAGCAGCGCAAGGACGCGGCCAATCGGCTCTCGGATGTCATGGCGGCCCACGGCCACCCCAACACCATCGTCGCCGTCATGGGCAACACCGCCGCGGGCAAGACCACGGCGCTGCGCACGCTCGACAACTTCGCCCATCTGGGCGCGCACCTCGACGGTGCCATCAACCCCGATCCCATCAAGGCCGACCTGGTGCAGCTCGCACGCAAGCCGGATGGCCAGAACACCATCAGCCATAAACAGGCACATCAGGAGGGAAACGTCATCTCCCAGCGCGTCGAGTACGACATGCTCAAAACCAAGGGCTCCTCGCTGGTGTATGACAAGCGTTTCGCCAAGCGCCATGAGTTCAGCGAGATGCTGCGGACCGCGGAGCAGCACGACAAGAAAGTTCAGATCGTCGACATCGACTCGGGTCTCACCCGCTCGGCCGTCCGCGTCCTGATGCGCCCGATCGACAGCGCCGAACCCCGGGTCCCCTTCAACGCGGTGGCCGAGGGCTTCATCGGCACCCGGGTGAACCGCGAGGAGGTGCTCCGCGGGCGTCCTGACGAAGTGGCCTCCGATGGCACGCGTGTGCGCGGCTTCAAGGGCGTCATCGACAACCCGCGAGTCACCAGTTACGACCTGTTCGTGCCCGACAACAAGGGGACCCCGGTCCGGGTGGCCTACAAGCGCGATGGCGTATGGCACGGCCCGAAGACGCAAGAGCAGGAGCAGTTGTTCGACCGCTCGGTGAAGAGCAACCCCTACAAGTCCGTGGAAGTGGCTCGTCGCATCGTGATCGACTCGAACTTCATCCACAAGCAGGTCGAGGAAGCGCCGGAGGCCTTCAAGGCCCCCATGCGAGAGGCGCTGTCGCGCTTCCAGGGCATGACGTTGGAACAGGCGCTCGATGCGCACTCCAGGAAGATCAACTGA
Protein sequence:
MLAMVRRRSPPPYDDLSKVIANSGGKLSTTEVFSNPAEGHQGRKPNYAQTERFLLQPGNWHPERAQIQQRLGQQRKDAANRLSDVMAAHGHPNTIVAVMGNTAAGKTTALRTLDNFAHLGAHLDGAINPDPIKADLVQLARKPDGQNTISHKQAHQEGNVISQRVEYDMLKTKGSSLVYDKRFAKRHEFSEMLRTAEQHDKKVQIVDIDSGLTRSAVRVLMRPIDSAEPRVPFNAVAEGFIGTRVNREEVLRGRPDEVASDGTRVRGFKGVIDNPRVTSYDLFVPDNKGTPVRVAYKRDGVWHGPKTQEQEQLFDRSVKSNPYKSVEVARRIVIDSNFIHKQVEEAPEAFKAPMREALSRFQGMTLEQALDAHSRKIN
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42329.8 | 378 | 9.69 | -0.688 | 37.93 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Nicotiana benthamiana | Disease name: NONE |
| Host classification: Eudicots | NCBI Species: 4100 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417
Pfam:
SMART:
KEGG:
PRINTS: