Effector profile
| PlantPEAD ID: PlantPEAD00327 | Uniprot ID: Q87XG7 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. tomato strain ATCC BAA-871 / DC3000 | Other name: Pseudomonas syringae tomato |
| Gene name: Cip1 | NCBI Gene ID: AE016853 | |
| Entry name: Q87XG7_PSESM | Protein name: Lipoprotein, putative | |
| DOI: 10.1371/journal.ppat.1005874 | ||
Gene/Protein information
Gene sequence:
ATGCCCCCTGTTCGTTTTCTTGCACCGTTGAGCCTTGCGCTGCTGACGGCGTGTGCGCAAACGCCCAAGAACATCGTTTCGATCGACACGCAAAGCGACTGCCCGCTGGCCCTCAAAACCGGTCAGACGCTGATCCTCACGCTGCCCAGCAACCCGACGACCGGCTTTCGCTGGCTGACCCAGAACCCGGCGCAAAGTATCCTGCGCAGCCTTGGGCCGGAGGTGTACGCCAACGCCGAGAGCAAGGAGATGGTCGGCAACGGTGGGCAGTCGGTCTGGCGCTACAAGGCAACTGACGCAGGGACCGGGCGACTGGTGATGACCTACCAGCAGCCGTGGGCTCCGGAGGTGCCGCCGGAGCAGACCTTCGAGTGCGCAATCACGGTGAACTGA
Protein sequence:
MPPVRFLAPLSLALLTACAQTPKNIVSIDTQSDCPLALKTGQTLILTLPSNPTTGFRWLTQNPAQSILRSLGPEVYANAESKEMVGNGGQSVWRYKATDAGTGRLVMTYQQPWAPEVPPEQTFECAITVN
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 14089.2 | 130 | 6.17 | -0.126 | 63.34 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR036331,IPR018990
Pfam: PF09394
SMART:
KEGG: pst:PSPTO_4211
PRINTS: