Effector profile
PlantPEAD ID: PlantPEAD00331 Uniprot ID: G2X4U8 Source: Article
Localization: Apoplastic(Pre) Pathogen taxonomy ID: 27337 Pathogen type: Fungi
Species: Verticillium dahliae Strain: strain VdLs.17 / ATCC MYA-4575 / FGSC 10137 Other name: Verticillium wilt
Gene name: Vd2LysM NCBI Gene ID: XM_009654916
Entry name: G2X4U8_VERDV Protein name: LysM domain-containing protein
DOI: 10.1111/mpp.12520
Gene/Protein information
Gene sequence:
GTGTCTTTAGATGGCCGCCCAAACTACATAAGAAGTCGAACACGCCCGCGTCGTAACAATCATTCAGAACATCTGTGTATTCTCCCGGCTTCAGTACCAGACTCAGGTTCTCTCCCACTACTAAAACTCAACTTGCAATCTCGCATTACAATGCGGCCCGACGTTTTCGTGCTCTTCACAGCCTTCCTAGGCCCCGCAGCTGCCTACCGAAGGACATGCAGTCATACCGGGAAGGGTGAAGGGTGGTACATCATCAGAAGAGGCGACAACTTTAACGCCGTTGCGGCCGATTTTTGCACTTCAACAAACGTCCTCACGGAATGGAACCATATCAGCACGATCACAGATAACATGGTCAACACCAAAATCAAGGTGCCTTGCAGATGGAACGCTGGCAAACAGCGCGACTGCCTAAAAGACCAGAAGAGTAGCAACGGCTGGTACCACATCGTGTCTGGCGACGAATTGAAGGATATCGCATACGACTTCTGCACGACATCGGGATCACTGGCGGGCATGAACGGAATATCAAACCCGGACTACATCAAGGCCAACACGGACATCGTTGTGCCGTGCAGCTGGAACTAAGTCAGAAGGTGGGAGTGAAGGCTGAAGAATGCCACGGGCCAATCGGTACGGTCAACCGCCATCAACCAACTGATGCAGAGGTGCCGTAGCCAATGCTTCCTGGGGATCAGCGTGGGAAGGGTTGGATGTTGTGAAGCTTTCAAGGGTTCTATCAAGAGGAACTGACATGTGGCCTCGTGTCCTTGGCCTTGCTCTTTTCCTTCCTGTAACTAGCTAGTTAGCTAACACAAGGCTTTATACTTGCCCTTAA
Protein sequence:
MRPDVFVLFTAFLGPAAAYRRTCSHTGKGEGWYIIRRGDNFNAVAADFCTSTNVLTEWNHISTITDNMVNTKIKVPCRWNAGKQRDCLKDQKSSNGWYHIVSGDELKDIAYDFCTTSGSLAGMNGISNPDYIKANTDIVVPCSWN
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
16151.2 145 7.6 -0.326 28.83
Plant infestation information
Experimental plant: Solanum lycopersicum (related: tomato)
Susceptible plant: Gossypium hirsutum, Lactuca sativa, Solanum lycopersicum Disease name: Vascular wilt
Host classification: Eudicots NCBI Species: 3635, 4236, 4081
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.