Effector profile
| PlantPEAD ID: PlantPEAD00342 | Uniprot ID: Q6TKR8 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 347 | Pathogen type: Bacteria |
| Species: Xanthomonas oryzae | Strain: pv. oryzicola strain BLS256 | Other name: |
| Gene name: AvrRxo1 | NCBI Gene ID: AY395713 | |
| Entry name: Q6TKR8_XANOQ | Protein name: AvrRxo1-ORF1 | |
| DOI: 10.1016/j.str.2015.06.030 | ||
Gene/Protein information
Gene sequence:
GATCGCAGCATGCGACGCATTTTTATAGCTTCGTTCGCTGCTCATATAGTTCGTAAGGTGTGCGAGTTGCGATTCGAATCGCTCTTAATGTTTGCAGGGTCAGGCACACCTGTATTGCATTGGACTTTTGACATCTTTTTAACATGAAAAACAAGACAGACATTGCTGGCATAGCCGGACTTTCTACGTCTCATGTTTCCTTTGATGACGCAGAATCCAAAAGCGTCCTAGATGGATCAACACAGTCTACGCCGGAGTACAAATTCCAGACCCCGCTTGATCAGTTGCCGGCTAGGCCCGCTGGTCCGAAGAGCAGTAACACAACTGATGCTTACATTCATGAATCACTGCCGCATTCGGTTCCAATCGCAGGTGCATCGACCTCCGCGGTGACACATCAACAGGCTACTCAGCGTAAAGGCACCGATGAGATCTATGGTTTGGGCAGCCTCCCATCTGCTGGTCCAGGGCGATGGGAGTATCTTGCGAATCCGGGGAACTGGCATCCCGAGCGCCGTAAGTTACACGAAAAGCTATTAGATCAAGCGCGATCTTCTGCCTTGACCCTGGCAGAATCCCTTGAGAGTGATGGCTGCCAACCGACATTGTTTGCGCTGCGCGGAAATACCGCAACGGGTAAAACACGGATTGCGACAAAAAAGATCCCGGTGCTCGCAGCAGCTCTGAAGAAGACAGCTGGGAAAGGTTGCGTGAATCCAGATGTATTCAAGAGTTCGCTTGCGAAATCCGAGACAGGCGCCAAGATATTTAGTTCGGCACAAGTGCATAGCGAGTCATCTTTTCTTGCCGACCGGTTTGAAGGCGGACTTCGCTCTCAAAAGACGGGCAGCGGTGCAATCGCTAGCATTGTTGTCGACAAGCGCTTGTCAAGAGAGTACGAAATTGATAGCTACATACAACTAGCGAAAGAAACCGGTAGAAAAGTGGAATTGTGCGATATCGACGCGCCCCTAGAGAATTCTTTGGTGGGAGTTTTGCAGCGAAAACCGGAAGGTGAAGATCCTAGGCCTCCGTACCCTGTAGTCTCGAGTGGATTTGTAGCCGTACGGAGCAATAGAATGTACGTGATAGACAGGTTCATTGCCGATCCGAGCCTGGGAAACTACCGACTATTCGGAACAGCTGAAGATGGTGAGAAGGTCATGGTTGCTAGCGTGATTGGCGGTGAGTTTAGTGTAGAGAATGCTGAGTTGTATGAAAAAATCACGTCCCCACAGCTCTCGGTTACGGGCGATTTGGCTGATAAGGTAATCGACAAGGAATTGATTGATCGTCTGGAAAATAATATAGCTGACCCCGAGCGGGCGGCCAAGACGCGAGCCGCCCTGGAAAAATACAGCGGTAAGTCATGGTCGGCCGCGCTAGCTGCTCACAGCGAGCTAATTTGA
Protein sequence:
MKNKTDIAGIAGLSTSHVSFDDAESKSVLDGSTQSTPEYKFQTPLDQLPARPAGPKSSNTTDAYIHESLPHSVPIAGASTSAVTHQQATQRKGTDEIYGLGSLPSAGPGRWEYLANPGNWHPERRKLHEKLLDQARSSALTLAESLESDGCQPTLFALRGNTATGKTRIATKKIPVLAAALKKTAGKGCVNPDVFKSSLAKSETGAKIFSSAQVHSESSFLADRFEGGLRSQKTGSGAIASIVVDKRLSREYEIDSYIQLAKETGRKVELCDIDAPLENSLVGVLQRKPEGEDPRPPYPVVSSGFVAVRSNRMYVIDRFIADPSLGNYRLFGTAEDGEKVMVASVIGGEFSVENAELYEKITSPQLSVTGDLADKVIDKELIDRLENNIADPERAAKTRAALEKYSGKSWSAALAAHSELI
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 45260.8 | 421 | 6.29 | -0.412 | 30.7 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found), Solanum melongena (related: eggplant) | |
| Susceptible plant: Oryza sativa | Disease name: Rice bacterial leaf streak |
| Host classification: Monocots | NCBI Species: 4530 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR027417,IPR010488
Pfam: PF06414
SMART:
KEGG:
PRINTS: