Effector profile
PlantPEAD ID: PlantPEAD00343 Uniprot ID: Q87W07 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. tomato strain ATCC BAA-871 / DC3000 Other name: Pseudomonas syringae tomato
Gene name: HopI1 NCBI Gene ID: AE016853
Entry name: Q87W07_PSESM Protein name: Type III effector HopI1
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGATCAACCTCACCCACATTGCGTCTTCATTGGCGCGGGCAGCGCTCAGCGATTCGACAAAGCCGAAGATGGAGCGCGCGATAAACGTCGCGAGCCACATCGCTGGCAAAGTCGCGTTGCAGGTCACCAGCTCATTACTGGAGCAGAAAGGTCTGCTTAACGAGCGTCAGCAGAAAGGGCTCTCGATGATTCTGAAGGCCTTGAGCGGCAAGGAGCCGGTGAACAATGTCGAGACGCACGAAGGGGGAGGCCGATTCAATCTGGCGCGAGCCGCCTTCGACGTGGCCAGCGTTGTCTGGGAGCGCGACAAGTCGATGCATAACGTGATGAGCTTTCTGGGCGTCAGCGACAGCAAGGGCAAGATGTTGTTCTCTCTGGGCAAGAAGCTGGCGGATGCAATGGCCAAGCCTGAGCCTGGCAAGGACAACAGTGAGGCCACAAATGCGCGCCATGCCTATTTCTCCAGCAACTTGAAACTGAACAAGTTGATGAACGACCTCACTGACCAGGTTTTCAACAAGATTCGCCAGTCGAACGGTGATCGCGTGCGACGACCCATGCCAGAACCATTCTGGAGACCTTACGGCGCCCAACAGCAAGCGCGCCCGCAAACGCCTCCCGGCACTCGCCCACAAGCCAACAGCGCCCCGCCACCGCCGCCGAAAGCAGAGCCACGACCTGCGTCGGGCCGGCCTGACGGCGCCCAACAGCAGGCGCGCCCGGAAACGCCGCCTCGTACTCGACCGCAGGCCAATAGCACTCCGCCACCGCCGCCGAAAGCAGAGCCACGACCTGCGTCGGGCCGGCCTGACGGCGCCCAGCAGCAAGCACGCCCGGAAACGCCGCCGCGCACTCGCCCGCAGGCGAACAGCACGCCGCCACCGCCGCCCAAGGCAGAGCCACGACCTGCGTCCGGCCGGCCTGACGGCGCCCAACAGCAAGCACGCCCGGAAACGCCACCTCGCACTCGCCCCCAAGCGAACAGCGCGCCGCCTCCGCCGCCCAAAGCAGAGCCACGACCTGCGTCCGGCCGGCCTGACGGCACCCAACAGCAAGCACGCCCGGAAACGCCACCTCGCACTCGCCCCCAAGCGAACAGCGCGCCGCCTCCGCCGCCCAAAGCAGAACCCAGCGCAGGCGGCGAACGGCCTTCAACGGCGCGGCCCAATAACACATCGGCTGCTGACGCATCTGCCAGGGTGGGCGATTCCGCACCTGCCAAGCCGCCCGTCAAGCCGTTGTACGAGCACTTGGGCCTCACTGACATGTCGGTAGACTTATCCGCCGTTAAAAAGGCTTACAGAGATGCCGCGATGAAGAACCACCCTGATAAAAACCGCGGCAACGAGGCCGAGGCGGCCGAGCGCTTCAAAGTCATTTCAAATGCGTACAAGATTTTGTCCGACCCGGAGTTGCGCAAAGCATACGACAACGGCCGTATCAATGAGGCTGGTAATAGGGCATGA
Protein sequence:
MINLTHIASSLARAALSDSTKPKMERAINVASHIAGKVALQVTSSLLEQKGLLNERQQKGLSMILKALSGKEPVNNVETHEGGGRFNLARAAFDVASVVWERDKSMHNVMSFLGVSDSKGKMLFSLGKKLADAMAKPEPGKDNSEATNARHAYFSSNLKLNKLMNDLTDQVFNKIRQSNGDRVRRPMPEPFWRPYGAQQQARPQTPPGTRPQANSAPPPPPKAEPRPASGRPDGAQQQARPETPPRTRPQANSTPPPPPKAEPRPASGRPDGAQQQARPETPPRTRPQANSTPPPPPKAEPRPASGRPDGAQQQARPETPPRTRPQANSAPPPPPKAEPRPASGRPDGTQQQARPETPPRTRPQANSAPPPPPKAEPSAGGERPSTARPNNTSAADASARVGDSAPAKPPVKPLYEHLGLTDMSVDLSAVKKAYRDAAMKNHPDKNRGNEAEAAERFKVISNAYKILSDPELRKAYDNGRINEAGNRA
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
52550 488 10.32 -1.043 53.45
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana Disease name: Bacterial speck
Host classification: Eudicots NCBI Species: 4081, 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.