Effector profile
| PlantPEAD ID: PlantPEAD00351 | Uniprot ID: Q8PC98 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 339 | Pathogen type: Bacteria |
| Species: Xanthomonas campestris | Strain: pv. campestris strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25 | Other name: |
| Gene name: PIP | NCBI Gene ID: AE008922 | |
| Entry name: Q8PC98_XANCP | Protein name: Proline iminopeptidase | |
| DOI: 10.1111/mpp.12677 | ||
Gene/Protein information
Gene sequence:
ATGCGGCAGCGGTTCTGTTTGCACTGTCGAGCAAGCAACTGCCCTGAAGGACGGATTCCACACCAAGCTGTGTGCCTGCGCGCAGCGCCATGTCCCTGCGCATCGCCGCGCGGCGTGCCTCTGGCAGCAGCCGATACAATGCGGCCTTTCCCGCAGGACCGACGCATGCGCACGCTCTATCCCGAGATCACGCCCTTCGACCAGGGCACCCTCCAGGTCGACGACCGCCACACCCTCTACTTCGAGCAATGCGGTAACCCGCAGGGCAAGCCGGTGGTGATGCTGCATGGTGGCCCGGGCGGCGGCTGCAATACCAAGATGCGGCGGTTCCATGACCCGGCCAAGTACCGCATCGTGCTGTTCGACCAGCGTGGCGCCGGCCGCTCCACGCCGCATGCCGATCTCACCGACAACACCACCTGGGATCTGGTCGCCGACATCGAACGGCTGCGTGCGCATCTGGGGATCGACCGCTGGCAGGTGTTTGGCGGCAGCTGGGGCTCGACCCTGGCGCTGACGTACGCGCAGACCCATCCGCAGCAGGTCACCGAGCTGGTGTTGCGCGGCATCTTCCTGCTGCGCCGCTGGGAGCTGGAGTGGTTCTACCAGGAAGGCGCGAGCCGGCTGTTCCCGGATGCGTGGGAGCACTACATCGCCGCGATTCCCGCAGAGGAACGGCACGACCTGATCTCTGCCTTCCATCGCCGCCTCACCAGCACCGATGAAACCACCCGCCTGGCCGCCGCCAAGGCCTGGAGCGTGTGGGAAGGCGCCACCAGCTTCCTGCATGTGGACGAGGATTTCGTCACCGGGCATGAGGACGCGCATTTCGCGCTGGCCTTCGCACGTATCGAGAACCATTACTTCGTCAACGGCGGCTTCTTCGATGCCGAAGACAAGCTGCTGCGCGACGCGCACCGCATCGCCGATATTCCCGGGGTGATCGTGCAGGGGCGCTACGACGTTGTGTGCCCGATGCAGAGCGCGTGGGAGCTGCACAAGGCGTGGCCGAAGGCCGAGTTGAAGATCAGCCCGGCGGCCGGGCACTCGGCCTTCGAGTCGGAGACTGTCGACGCGCTGGTGCGTGCGACCGACAGCTTCGCCTGA
Protein sequence:
MRTLYPEITPFDQGTLQVDDRHTLYFEQCGNPQGKPVVMLHGGPGGGCNTKMRRFHDPAKYRIVLFDQRGAGRSTPHADLTDNTTWDLVADIERLRAHLGIDRWQVFGGSWGSTLALTYAQTHPQQVTELVLRGIFLLRRWELEWFYQEGASRLFPDAWEHYIAAIPAEERHDLISAFHRRLTSTDEATRLAAAKAWSVWEGATSFLHVDEDFVTGHEDAHFALAFARIENHYFVNGGFFDAEDKLLRDAHRIAEIPGVIVQGRYDVVCPMQSAWELHKAWPKAELKISPAAGHSAFEPETVDALVRATDSFA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 35466.9 | 313 | 5.7 | -0.342 | 40.96 |
Plant infestation information
| Experimental plant: Nicotiana tabacum (related: common tobacco) | |
| Susceptible plant: Brassica napus, Arabidopsis thaliana | Disease name: Black rot |
| Host classification: Eudicots | NCBI Species: 3708, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR029058,IPR000073,IPR002410,IPR005944
Pfam: PF00561
SMART:
KEGG: xcc:XCC0836
PRINTS: PR00111,PR00793