Effector profile
PlantPEAD ID: PlantPEAD00354 | Uniprot ID: L7NCS1 | Source: Database |
Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 4784 | Pathogen type: Oomycota |
Species: Phytophthora capsici | Strain: Pc537 | Other name: |
Gene name: NLP10 | NCBI Gene ID: HM543176 | |
Entry name: NLP10_PHYCP | Protein name: NLP effector protein 10 | |
DOI: 10.1093/nar/gkab1037 |
Gene/Protein information
Gene sequence:
ATGTTCAAGACGTTCATTATCGCTGCCGTCGCCGTCGCTACCGTTCGAGCGGCAGTCATTGGCCACGACCAGGTCGTGCCGTTCGCACAGCCAACGCCGACTTCCATCTCCCAGACTACCGCCGTCAATTTCAAGCCACAGCTCCACATTACCAACGGCTGCCATCCGTATCCGGCCGTCGACGCGGATGGTAACACCAGTGGCGGCCTCAATCCGACCGGTTCGTCCAGTGCCGGATGCAAAGGCTCGGGCTACGGCAGTCAAATCTACGGGCGATCGGCTTGGTACAACGGCGTCTGGGCGATCATGTACTCCTGGTACTTCCCCAAGGACTCGCCGTCCTCGGGCTTCGGTCACCGTCACGACTGGGAACACATTGTCGTGTGGCTCGACAACCCGGCGGTGGCTAGCCCGAAGATCCTCGCAGTGTCCACGTCGGCCCATAGCGGCTACACGGTCTACTATCCTCCCAACTCGAACTACTTGAACGGGAAGAGTGCTAAGATCGACTACTACAGCATTTTACTGATCAACCACGCGTTCCGCATGACGTCGGATGCTGGCGAGACGCAGAACCTGATCATGTGGGACCAAATGACCGACGCGGCGCGAACGGCGCTCCAGAACACGGACTTTGGCGACGCAAACGTGCCGTTTAAAGACGGCAACTTTGAATCGAAGCTCGCGAACGCCTGGTACCAGTAG
Protein sequence:
MFKTFIIAAVAVATVRAAVIGHDQVVPFAQPTPTSISQTTAVNFKPQLHITNGCHPYPAVDADGNTSGGLNPTGSSSAGCKGSGYGSQIYGRSAWYNGVWAIMYSWYFPKDSPSSGFGHRHDWEHIVVWLDNPAVASPKILAVSTSAHSGYTVYYPPNSNYLNGKSAKIDYYSILLINHAFRMTSDAGETQNLIMWDQMTDAARTALQNTDFGDANVPFKDGNFESKLANAWYQ
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
25471.4 | 234 | 6.42 | -0.241 | 27.65 |
Plant infestation information
Experimental plant: | |
Susceptible plant: Capsicum annuum | Disease name: Phytophthora blight of pepper |
Host classification: Eudicots | NCBI Species: 4072 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR008701
Pfam: PF05630
SMART:
KEGG:
PRINTS: