Effector profile
| PlantPEAD ID: PlantPEAD00362 | Uniprot ID: L7NCR0 | Source: Database |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 4784 | Pathogen type: Oomycota |
| Species: Phytophthora capsici | Strain: Pc537 | Other name: |
| Gene name: NLP1 | NCBI Gene ID: HM543167 | |
| Entry name: NLP1_PHYCP | Protein name: NLP effector protein 1 | |
| DOI: 10.1093/nar/gkab1037 | ||
Gene/Protein information
Gene sequence:
ATGCAACTACGTGCCTTCATCTCTGTCTTTGCCTCGCTTGCTTGCGTCAATGCTGCTGTTATCGACCACGACCAGGTCGTTCCGTTCGCCCAACCGACTCCAACCACGACGTTGCAGACGTTAGCCGTCCAGTATAAACCTCAGATCTACATCGCCAACGGCTGCCATCCGTACCCGGCCGTCGACGAAGATGGCAACACCAGTGGTGGGCTCAAGCCTACGGGATCCCAAAGCGCTGGATGTAAGGGATCCGGATACGGCAGTCAAATCTACGGTCGTGCTGTTGCGTATGAGGGTGTCTACGCCTTCATGTATTCGTGGTACATGCCTAAGGACGAGACGCTGCCTGGGCTTGGACACCGTCACGACTGGGAGGCGTGCGTTGTCTGGTTGGACTCACTGGAAAATCCCAACGTCGTCGCTCTCTCGGCGTCCTATCACAGCACATACTTGACGTATTATCCTCCGGATTCGGACTATTTAGACGGCAACAGCGCCAAGATCGAGTACTCTACGAGTTGGGTTATCCTTGACCACTTGTTGTCCGCCACTTCGACGTCGGGCGAGACGCAGGACCTGATCATGTGGGACCAGTTGACCGACGCTGCCCGCACCGCGTTGGAAGACACGGACTTTGGAGACGCCAATGTCCCGTTCAAGGATGCTAACTTCGAGACTAAACTAGCTAACGCGTACTACACT
Protein sequence:
MQLRAFISVFASLACVNAAVIDHDQVVPFAQPTPTTTLQTLAVQYKPQIYIANGCHPYPAVDEDGNTSGGLKPTGSQSAGCKGSGYGSQIYGRAVAYEGVYAFMYSWYMPKDETLPGLGHRHDWEACVVWLDSLENPNVVALSASYHSTYLTYYPPDSDYLDGNSAKIEYSTSWVILDHLLSATSTSGETQDLIMWDQLTDAARTALEDTDFGDANVPFKDANFETKLANAYYT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 25647.4 | 234 | 4.42 | -0.232 | 33 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Capsicum annuum | Disease name: Phytophthora blight of pepper |
| Host classification: Eudicots | NCBI Species: 4072 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR008701
Pfam: PF05630
SMART:
KEGG:
PRINTS: