Effector profile
| PlantPEAD ID: PlantPEAD00365 | Uniprot ID: Q2QCI9 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. tomato strain ATCC BAA-871 / DC3000 | Other name: Pseudomonas syringae tomato |
| Gene name: HopAB3(avrPtoB) | NCBI Gene ID: DQ133535 | |
| Entry name: HPAB3_PSEUB | Protein name: Effector protein HopAB3 | |
| DOI: 10.1128/AEM.72.1.702-712.2006 | ||
Gene/Protein information
Gene sequence:
TGGAACTCTTTCCTGCTCTTTTTCCACACAGAGCTGATCTTGCGGGTGATTCGGTCCGCAGGCAGAAGATCGGAGAGGATCAGCATATGGCGGGTATCAATGGAGCGGGACCATCGGGCGCTTATTTTGTTGGCCACACAGACCCCGAGCCAGCATCGGGGGGCGCACACGGATCCAGCAGTGGCGCAAGCTCCTCGAACAGTCCGCGCTTGCCGGCGCCTCCGGATGCACCCGCGTCGCAGGCGCGAGATCGACGCGAAATGCTTTTGCGAGCCAGGCCGCTGTCGCGCCAAACCAGGGAGTGGGTGGCGCAGGGTATGCCGCCAACGGCGGAGGCTGGAGTGCCCATCAGGCCGCAGGAGTCTGCCGAGGCTGCAGCGCCGCAGGCACGTGCAGAGGAAAGACACACGCCGGAGGCTGATGCAGCAGCGTCGCATGTACGCACAGAGGGAGGACGCACACCGCAGGCGCTTGCCGGTACCTCCCCACGCCACACAGGTGCGGTGCCACACGCCAATAGAATTGTTCAACAATTGGTTGACGCGGGCGCTGATCTTGCCGGTATTAACACCATGATTGACAATGCCATGCGTCGCCACGCGATAGCTCTTCCTTCTCGAACAGTACAGAGTATTTTGATCGAGCATTTCCCTCACCTGCTAGCGGGTGAACTCATTAGTGGCTCAGAGCTCGCTACCGCGTTCCGTGCGGCTCTCCGTCGGGAGGTTCGCCAACAGGAGGCGTCAGCCCCCCCAAGAACAGCAGCGCGGTCCTCCGTAAGGACGCCGGAGCGGTCGACGGTGCCGCCCACTTCTACGGAATCATCATCGGGCAGCAACCAGCGTACGTTATTAGGGCGGTTCGCCGGGTTGATGACGCCTAATCAGAGACGTCCGTCGAGCGCTTCGAACGCGTCTGCCTCTCAAAGGCCTGTAGACAGAAGCCCGCCACGCGTAAACCAGGTACCCACAGGCGCTAACAGGGTTGTGATGCGTAATCATGGTAATAACGAGGCCGACGCCGCGCTGCAAGGATTGGCTCAGCAGGGGGTTGATATGGAGGACCTGCGCGCCGCGCTTGAAAGACATATATTGCATCGCCGCCCGATCCCCATGGATATAGCGTACGCCTTGCAGGGTGTGGGCATTGCGCCAAGTATCGATACGGGAGAGAGCCTTATGGAAAACCCGCTGATGAATTTGAGTGTTGCGCTGCACCGCGCACTAGGGCCTCGTCCCGCTCGTGCTCAAGCGCCTCGTCCAGCCGTTCCGGTGGCTCCCGCGACCGTCTCCAGGCGACCAGATAGCGCGCGTGCCACAAGATTGCAGGTAATACCGGCGCGGGAGGATTACGAAAATAATGTGGCCTACGGAGTGCGCTTGCTGAGCCTGAATCCGGGCGCGGGGGTCAGGGAGACTGTTGCGGCCTTTGTAAACAACCGTTACGAGCGGCAGGCGGTTGTTGCCGACATACGCGCAGCCCTAAATTTATCTAAACAATTCAATAAGTTGCGTACGGTCTCTAAGGCCGATGCTGCCTCCAATAAACCGGGCTTCAAGGATCTGGCGGACCACCCAGACGACGCGACGCAATGCCTTTTTGGTGAAGAATTGTCGCTGACCAGTTCGGTTCAGCAGGTGATCGGCCTGGCAGGTAAGGCAACGGACATGTCGGAGTCTTACAGCCGAGAGGCAAATAAGGACCTGGTGTTCATGGATATGAAAAAACTTGCCCAATTCCTCGCAGGCAAGCCTGAGCATCCGATGACCAGAGAAACGCTTAACGCCGAAAATATCGCCAAGTATGCTTTTAGAATAGTCCCCTGA
Protein sequence:
MAGINGAGPSGAYFVGHTDPEPASGGAHGSSSGASSSNSPRLPAPPDAPASQARDRREMLLRARPLSRQTREWVAQGMPPTAEAGVPIRPQESAEAAAPQARAEERHTPEADAAASHVRTEGGRTPQALAGTSPRHTGAVPHANRIVQQLVDAGADLAGINTMIDNAMRRHAIALPSRTVQSILIEHFPHLLAGELISGSELATAFRAALRREVRQQEASAPPRTAARSSVRTPERSTVPPTSTESSSGSNQRTLLGRFAGLMTPNQRRPSSASNASASQRPVDRSPPRVNQVPTGANRVVMRNHGNNEADAALQGLAQQGVDMEDLRAALERHILHRRPIPMDIAYALQGVGIAPSIDTGESLMENPLMNLSVALHRALGPRPARAQAPRPAVPVAPATVSRRPDSARATRLQVIPAREDYENNVAYGVRLLSLNPGAGVRETVAAFVNNRYERQAVVADIRAALNLSKQFNKLRTVSKADAASNKPGFKDLADHPDDATQCLFGEELSLTSSVQQVIGLAGKATDMSESYSREANKDLVFMDMKKLAQFLAGKPEHPMTRETLNAENIAKYAFRIVP
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 61818.5 | 579 | 9.96 | -0.472 | 50.26 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR015133,IPR031759,IPR038342,IPR038448,IPR033743
Pfam: PF09046,PF16847
SMART:
KEGG:
PRINTS: