Effector profile
PlantPEAD ID: PlantPEAD00366 Uniprot ID: Q88A08 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: Other name:
Gene name: HopC1 NCBI Gene ID: AE016853
Entry name: Q88A08_PSESM Protein name: Type III effector HopC1
DOI: 10.1111/nph.15182
Gene/Protein information
Gene sequence:
ATGACAATCGTGTCTGGACACATCGGAAAACACCCAAGCCTAACCACTGTTCAAGCTGGGTCTTCGGCTTCGGTCGAGAATCAAATGCCTGATCCTGCACAGTTCAGTGATGGACGGTGGAAAAAGCTTCCGACCCAATTGTCGTCAATTACATTGGCGAGATTCGATCAGGATATTTGCACGAATAATCATGGCATCAGTCAGCGTGCAATGTGCTTTGGCCTTTCATTGAGCTGGATTAACATGATTCATGCCGGGAAAGATCATGTTACGCCCTATGCATCGGCAGAAAGAATGAGGTTTCTGGGTTCCTTTGAAGGGGTGGTGCATGCTCGTACTGTTCATAACTTCTATCGGACTGAGCACAAATTTCTGATGGAGCAAGCTTCCGCAAACCCCGGAGTATCAAGTGGCGCGATGGCTGGCACAGAAAGTTTATTGCAAGCTGCTGAGTTGAAGGGGTTAAAGCTTCAACCTGTTCTAGAGGACAAGTCGAACTCAGGCCTACCCTTCCTAATTGCGTGTAAGCAGTCAGGGCGGCAGGTGAGCACAGATGAAGCTGCGCTAAGCTCCTTATGTGATGCAATTGTAGAAAATAAGAGAGGGGTAATGGTGATATACAGCCAAGAAATTGCCCACGCTTTGGGCTTTTCTGTATCATCAGATGGCAAAAGAGCGACCTTATTTGATCCCAATCTCGGAGAGTTTCATACACACTCGAAAGCGTTGGCTGATACTATCGAAAACATATCATCGGCAGATGGGCTGCCTTTAATCGGCGTTCAAGTATTCGCTTCAAAAATACACTGA
Protein sequence:
MTIVSGHIGKHPSLTTVQAGSSASVENQMPDPAQFSDGRWKKLPTQLSSITLARFDQDICTNNHGISQRAMCFGLSLSWINMIHAGKDHVTPYASAERMRFLGSFEGVVHARTVHNFYRTEHKFLMEQASANPGVSSGAMAGTESLLQAAELKGLKLQPVLEDKSNSGLPFLIACKQSGRQVSTDEAALSSLCDAIVENKRGVMVIYSQEIAHALGFSVSSDGKRATLFDPNLGEFHTHSKALADTIENISSADGLPLIGVQVFASKIH
Protein structure:
AlphaFold
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
28979.9 269 6.63 -0.131 42.35
Plant infestation information
Experimental plant: Prunus avium (related: sweet cherry)
Susceptible plant: Prunus avium Disease name: Bacterial canker of cherry
Host classification: Eudicots NCBI Species: 42229
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q8W5R5
Kinesin-like protein KIN-7D, mitochondrial
KIN7D
Arabidopsis thaliana (related: thale cress)
MASSSSRTRSSRPPSPASSTSSSHLSNRLIPRSNSTSASSLITSAAGIASRSMTPSRTFSDSGLIGSGSFGIGSPVPYPSEELLGDPMDDTISSERDSISVTVRFRPLSDREYQRGDEVAWYPDGDTLVRHEYNPLTAYAFDKVFGPQATTIDVYDVAARPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQESPGIIPLAIKDVFSIIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDSQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLLSSRSHTIFTLMVESSATGDEYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKATHIPYRDSKLTRLLQSSLSGHGHVSLICTITPASSSSEETHNTLKFASRAKSIEIYASRNQIIDEKSLIKKYQREISTLKLELDQLRRGMLVGVSHEELMSLKQQLEEGQVKMQSRLEEEEEAKAALMSRIQKLTKLILVSTKNSIPGYSGDIPTHQRSLSAGKDDKFDSLLLESDNLGSPSSTLALLSEGSLGFNHRRSSSKLNDENSPGAEFTQGVMTPDEIDLLVEQVKMLAGEIAFSTSTLKRLVDQSVNDPENSQTQIQNLEREIHEKQRQMRGLEQLIIESGEASIANASLVEMQQKVMSLMTQCNEKSFELEIKSADNCILQEQLQEKCTENKELHEKVNLLEQRLNAVSSEKSSPSCSNKAVSGEYADELKKKIQSQEIENEELKLEHVQIVEENSGLRVQNQKLAEEASYAKELASAAAVELKNLASEVTKLSLQNTKLEKELAAARDLAQTRNPMNGVNRKYNDGARSGRKGRISSSRSSGDEFDAWNLDPEDLKMELQVRKQREVALESALAEKEFIEDEYRKKAEEAKRREEALENDLANMWVLVAKLKKDNGALPEPNGTDPGRELEKSQSHAVLKERQVSSAPRQPEVVVVAKTEETPKEEPLVARLKARMQEMKEKEMKSQANGDANSHICKVCFESPTAAILLPCRHFCLCKSCSLACSECPICRTKISDRLFAFPS
Q9SJU0
Kinesin-like protein KIN-7M, chloroplastic
KIN7M
Arabidopsis thaliana (related: thale cress)
MASSSSRTRSRSPFSHRRPPSPYSSASSTSSSLINNRLLPRSSSTPTSTVYNSGGVTGSRSMSITRTISDSGPIGGSGTYGAQSYPSEGLIGESGQTITSERDSISVTVRFRPMSEREYQRGDEIVWYPDADKMVRNEYNPLTAYAFDKVFGPQSTTPEVYDVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQDFPGIIPLAIKDVFSIIQETTGREFLLRVSYLEIYNEVINDLLDPTGQNLRIREDSQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLMSSRSHTIFTLMIESSAHGDQYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGAYINKSLLTLGTVIGKLTEGKTTHVPFRDSKLTRLLQSSLSGHGHVSLICTVTPASSSTEETHNTLKFASRAKRIEINASRNKIIDEKSLIKKYQKEISTLKVELDQLRRGVLVGVSHEELLSLKQQLQEGQVKMQSRLEEEEEAKAALMSRIQKLTKLILVSTKNSIPGYLGDTPAHSRSISAGKDDKLDSLLLDSDNLASPSSTLSLASDARRSSSKFKDENSPVGSRAELTQGVMTPDEMDLLVEQVKMLAGEIAFGTSTLKRLVDQSMNDPENSKTQIQNLENDIQEKQRQMKSLEQRITESGEASIANASSIEMQEKVMRLMTQCNEKSFELEIISADNRILQEQLQTKCTENNELHEKVHLLEQRLSSQKATLSCCDVVTEEYVDELKKKVQSQEIENEKLKLEHVQSVEEKSGLRVQNQKLAEEASYAKELASAAAIELKNLADEVTKLSLQNAKLEKELVAARDLAAAAQKRNNNSMNSAANRNGTRPGRKARISDSWNLNQENLTMELQARKQREAVLEAALAEKEYIEEEFRKKAEEAKRREEALENDLANMWVLVAKLKKANSGALSIQKSDEAEPAKEDEVTELDNKNEQNAILKERQLVNGHEEVIVAKAEETPKEEPLVARLKARMQEMKEKEMKSQAAAAANADANSHICKVCFESPTATILLPCRHFCLCKSCSLACSECPICRTKISDRLFAFPS