Effector profile
| PlantPEAD ID: PlantPEAD00370 | Uniprot ID: Q3C000 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 339 | Pathogen type: Bacteria |
| Species: Xanthomonas campestris | Strain: pv. vesicatoria strain 85-10 | Other name: |
| Gene name: AvrBs1 | NCBI Gene ID: AM039951 | |
| Entry name: Q3C000_XANC5 | Protein name: Avirulence protein AvrBs1 | |
| DOI: PMID: 2979910 | ||
Gene/Protein information
Gene sequence:
TTACGCTTCTCCTGCATTTGTAACATGTAAAAGCTTGGAGGAAATAAAAATACTTATCCCCTCTATGATTTCTTCAACCCTAAAATCCAACAAACTCATTTCACGGATATGACTTCCTGCTTCATCTTTATCGTAAGTGCAAAGTGAAACACCTTGACGCAACGATCGGCTAATCTCATTAGCGATAAATTCCCTTTCTTGTATGGTCACCGCTGAAACCCTTTCAAGCGTTGACTTGCTGTCAAGTGCGGTTTGTGGGCCAAGCCATGATAGTTGGCGCTCGATAAAATCGGCGACCATTTTACTCTTGTGCCCATCATCATCTATCTCTTGTGCTATCGACAACATCTCCAAATTAAATTCAATCAGGGTAGCGACCGCCAAGGCACGAGATTCACCAACTGCTATAGCTTTAGCATCCCACAGTTCAAGCTTGGTGCAATATTCATTATGCCGCAAAGCACTGGCAGGTTTTCTTGATTGCAATAGCATCTGGTGTTCAGCCAATTCTTCAATAGAGTGAACAAAGTCGGTGGAGATTCTATCTGGATCATGCCTTATAAAGGGAGTAAGATTCCTTTCAATTAACCCCAACTTTTCGGCATGGCTAAGCGACCCACATATTTTTTCGTAGTCGGAATTAAATGCGTTATTGGATTTGAAAGAGTGCACGTCGCCGAAACCATTTCGAGACGTTAGATAGTCTGATTCACTACGGCGGCTGCTTTGGCCATATACGACTGAAGGAAGACCTCTGTATTTTTGTTTATCCTTCGCCCTTGGGACTTCAGATATCAGGTTCATCCGCACTTCCTTTTTTACAAGGGAGGCGGGCGTCATGACAATGTCATGCAGCGTGGATTTATTGCAAATCGTATCAACCTCTCTTTTGGCTGGCGTTTTTCCTTCCGCCCCAAGCTTACTAGTCACCTCTTGGGGGTTTGAAAATCTTAGAGATCGAATCATTAAAGGATTTCCTTCTCCATACTCTTCAGCAATCTTTGGATTTCTTTTTATTAGCAATTCCTTGACTGAAAATCCATCAATTAGCTCTTCGAGTTCGACTCTACCATTTATCTTAGCCAACCCTCTCTGCAACTGCGCTAAATTCTGAACTAATACCTTCTTTTGATGAACTCGCTCTAACGATGAGGTGTGCAAAGCAGCTATATTTTCTTTTATTACTCTTTTTCTAGGTGCTTTTTTCAAGGCTTGTGAATCGAGCGATGGCGCCACCAGTCCAGATTTCGTATAACTATCTTGCTGAGTGGCGACCTCCTCTTCACTGGGTGTTGAATCTATTATTTTTGAAGAGAAATTAACTTTCATGTCGGACAT
Protein sequence:
MSDMKVNFSSKIIDSTPSEEEVATQQDSYTKSGLVAPSLDSQALKKAPRKRVIKENIAALHTSSLERVHQKKVLVQNLAQLQRGLAKINGRVELEELIDGFSVKELLIKRNPKIAEEYGEGNPLMIRSLRFSNPQEVTSKLGAEGKTPAKREVDTICNKSTLHDIVMTPASLVKKEVRMNLISEVPRAKDKQKYRGLPSVVYGQSSRRSESDYLTSRNGFGDVHSFKSNNAFNSDYEKICGSLSHAEKLGLIERNLTPFIRHDPDRISTDFVHSIEELAEHQMLLQSRKPASALRHNEYCTKLELWDAKAIAVGESRALAVATLIEFNLEMLSIAQEIDDDGHKSKMVADFIERQLSWLGPQTALDSKSTLERVSAVTIQEREFIANEISRSLRQGVSLCTYDKDEAGSHIREMSLLDFRVEEIIEGISIFISSKLLHVTNAGEA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 49833.7 | 445 | 6.49 | -0.425 | 48.42 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Capsicum annuum, Solanum lycopersicum | Disease name: Bacterial leaf spot |
| Host classification: Eudicots | NCBI Species: 4072, 4081 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: xcv:XCVd0104
PRINTS: