Effector profile
| PlantPEAD ID: PlantPEAD00375 | Uniprot ID: Q1WEM6 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 552 | Pathogen type: Bacteria |
| Species: Erwinia amylovora | Strain: strain Ea1189 | Other name: Fire blight bacteria |
| Gene name: AvrRpt2EA | NCBI Gene ID: DQ344488 | |
| Entry name: Q1WEM6_ERWAM | Protein name: AvrRpt2Ea | |
| DOI: 10.1094/MPMI-12-17-0300-R | ||
Gene/Protein information
Gene sequence:
GTGAAAGTCAGTCATCTCACATCCCCCGCCCCTGTCGTAATCGAGCACCAGCCTCGTCAATCAGAGAAAGTAAGCCGCGATGGCGATGTCATCAAACCCTGGTCCCAGCTACCGGCCGCAGCGCCATCTTTTGGCGGATGTTTCGGCAAAAGTAAAAAGTCCAGAGGGTACGACTCTGGAAGCAGTTCCGGCTCTCGCAGTAACGCCGGCTTTCGCTTAAACCATGTACCTTATGTGTCTCAACAGAATGAGCGAATGGGCTGCTGGTATGCCTGCACCAGAATGCTGGGCCATAGCATCAGCAGCGGCCCACGGCTGGGGCTGCCAGAACTCTATGACTCTTCAGGCCCGCAAGGACTACAACAACGTGAAGATGTGCTCAGGCTGATGCGAAATGAAAACCTTGCCGAAGTGAGTTTACCGGAATCAAGGCAGTTTTCAGCCAATGAACTCGGCAATCTCTTGTCTCGCCATGGACCCATTATGTTTGGTTGGCAAACCCCGGCCGGCAGCTGGCATATGTCTGTGCTGACCGGGATAGACAAGCCCAACGATGCGATTATTTTTCACGATCCGCAACGCGGTCCGGATCTGACCATGCCGTTGGATTCATTCAACCAGCGTCTGGCATGGCGGGTGCCACACGCCATGTTATACAGTGAAAATTAG
Protein sequence:
KVSHLTSPAPVVIEHQPRQSEKVSRDGDVIKPWSQLPAAAPSFGGCFGKSKKSRGYDSGSSSGSRSNAGFRLNHVPYVSQQNERMGCWYACTRMLGHSISSGPRLGLPELYDSSGPQGLQQREDVLRLMRNENLAEVSLPESRQFSANELGNLLSRHGPIMFGWQTPAGSWHMSVLTGIDKPNDAIIFHDPQRGPDLTMPLDSFNQRLAWRVPHAMLYSEN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 24599.7 | 221 | 8.84 | -0.577 | 61.29 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Malus domestica | Disease name: Fire blight |
| Host classification: Eudicots | NCBI Species: 3750 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR022118
Pfam: PF12385
SMART:
KEGG:
PRINTS: