Effector profile
| PlantPEAD ID: PlantPEAD00378 | Uniprot ID: Q48M21 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. phaseolicola (strain 1448A / Race 6) | Other name: Pseudomonas savastanoi pv. phaseolicola |
| Gene name: HrcV | NCBI Gene ID: CP000058 | |
| Entry name: Q48M21_PSE14 | Protein name: Type III secretion component protein HrcV | |
| DOI: 10.1093/nar/gkab1037 | ||
Gene/Protein information
Gene sequence:
TCAAGCTGCGTGCTCGTTGTCTATTGGCTCAAGATCGTCTTCAAGGTCGAAGCGACCCATTACCTTGACCTTGGCCGCGTTGCTGATTTCTGCGAAAGACAGTACGGGAACGTGATAGAACTCCTCCCTCAACAAGGTCCGCAGTGGGCTGCGCAGGTCCTGCGCGACCAGCAGTACCGCCTGTTCGGGCGCGCGCACCGGAAATGCGATATTCATTTGTTGCACGAGCATCTGGCTGATCTCGTTACTCAGTGCGAAGAACGTTTCGGTCTGTGTCTGGCGCAGACCGTCGCGCAGCAAGCCCTCGCTTTCCGGCGTGAGCAGCCACACCTGCAGGCCTTCGGCACCGCAATACTGGTGGTAGATCTGCGATTTGAGCGCGATGCGCACGTAGTCGGTCAGCACGTTGGTATCGCGTTCATGCTGGCAATGCTCGATCAGGGTCTCGGCGATCAGCCGTATGGCTCTGAGCGGTACGCGCTCCGACGCGAGACGTTGCAGAACCGCCGAGAAGCGCGTCAGCGTGAGCACTCGCTGTATCTCTTGTGCAAGCTCCGGCTGCTCGGATTCCAGCCAGCTGAGGATTGCTTTGGTCTCCTGCAAGCCGATGAACTGAGGCGCGCAGGACTGCAATGCGCGTTCCATGCGTTCGACGATCAGGGTCATGGCGCTGACCGGGTTCAGCTCACCGCACTGCTCGGCGGGCAACCACACCCATTGATCTTCCTGGCGGTCGGTATTGCCCGGAATCGCCGCCGGGAGGTTTTCACCACCCAGTTGGCGGGCGTCCACGGCGACATGGGACTGGGTAAATGTCGCCTTGAGCATGGGTACGTCGTAGACGGTGAAGCGAAACTCGTCCGGAGGAAGATGATCGGCATGTTCAATGATGAACGACGGCAGGGTCAGACCGTATTGCACCACCAGTCTATTGCGTCGCCGACGTATTTCGCTGATCAGTGCCTCGATCTGTGCGCTGTCCTGGCCTGGGTGAAATTGCAGGACGAACTGCCGGCTGGGTGAGAAGGTACGCAGGTCTTCCTTGCCGTTCATTTCCGGGGCGACGGCAGTGGCGCGTTGTTCGTCGGGCTTGGGTCTTGCCCGTTGCAACTGCAGCATGCCACCGGCACCGCAGATGATCGCGATGGTGATGAATACTCCCGTGGGCATACCCGGCAGAGCCGCGAAGCCGAGCATGGCCACTGCGGCGATGATCCATGCCTTGGGCTGGCTGGTAATCTGTTCGGCGATTTCACGGCCAATGTTGGCCTCCGCGCTAGCCTCGGTATTGGGTACGCGGGTGATGATCATGCCGCAGGTTACGGAGATCAGCAGCGCCGGGATCTGTGCAATCAGGCCGTCGCCGATGGTCAGCACGGTGTACAGCTGCAACGCATCGCCCGCGCTCATATTGTGCTGCAACACGCCGATGGAAATACCGCCGATCATGTTGATGGCAACGATGATCAGGCTGGCAATGGCATCACCGTTGACGAACTTCATCGCGCCGTCCATGGCTCCGAACAACTGACTTTCCTTGTTCAGCTCGGCGCGACGCTTGCGCGCCTCCTGAACGGTTATCAGGTTGGCGCGCAGATCACTGTCGATCGACATCTGCTTGCCGGGCATAGCGTCCAGCGTGAACCGCGCGCCGACCTCGGCGACCCGTTCCGAACCTTTGGTGATAACCAGAAAGTTGACCACTGTCAGGATCAGAAAGATCACCAGGCCCACCGCCAGGTTGCCACCCACCACGAACTGGCCGAAGGCTTCGACAATGTGCCCGGCGTCCTGATTGAGCAGGATCAATCGTGTTGTGGAAATCGACAGCGCCAGACGAAACATGGTGGTCAGCAACAGCACGGCCGGAAAGGTCGAGAATGCCAGCGGTCTTGGCAAATGCATCGCCAGCATGATCAGCAGGCACGAGATACAGATGTTCACCGCGATCAACACATCAACCAGCCCGGTGGGCAGGGGGGTGATCATCATGAAGACAATGGCGATGACGAAGAATGCGCCGACCAGCTCTGACCGGCGCATGGCCGACAGGGCAATCATGTTCAGAAAGTTGATGACTTGATTCAT
Protein sequence:
MNQVINFLNMIALSAMRRSELVGAFFVIAIVFMMITPLPTGLVDVLIAVNICISCLLIMLAMHLPRPLAFSTFPAVLLLTTMFRLALSISTTRLILLNQDAGHIVEAFGQFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVGARFTLDAMPGKQMSIDSDLRANLITVQEARKRRAELNKESQLFGAMDGAMKFVNGDAIASLIIVAINMIGGISIGVLQHNMSAGDALQLYTVLTIGDGLIAQIPALLISVTCGMIITRVPNTEASAEANIGREIAEQITSQPKAWIIAAVAMLGFAALPGMPTGVFITIAIICGAGGMLQLQRARPKPDEQRATAVAPEMNGKEDLRTFSPSRQFVLQFHPGQDSAQIEALISEIRRRRNRLVVQYGLTLPSFIIEHADHLPPDEFRFTVYDVPMLKATFTQSHVAVDARQLGGENLPAAIPGNTDRQEDQWVWLPAEQCGELNPVSAMTLIVERMERALQSCAPQFIGLQETKAILSWLESEQPELAQEIQRVLTLTRFSAVLQRLASERVPLRAIRLIAETLIEHCQHERDTNVLTDYVRIALKSQIYHQYCGAEGLQVWLLTPESEGLLRDGLRQTQTETFFALSNEISQMLVQQMNIAFPVRAPEQAVLLVAQDLRSPLRTLLREEFYHVPVLSFAEISNAAKVKVMGRFDLEDDLEPIDNEHAA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 76611.3 | 695 | 5.41 | 0.272 | 52.4 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Phaseolus vulgaris | Disease name: Halo blight of bean |
| Host classification: Eudicots | NCBI Species: 3885 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR042194,IPR042193,IPR042196,IPR025505,IPR001712,IPR006302
Pfam: PF00771
SMART:
KEGG: psp:PSPPH_1292
PRINTS: PR00949