Effector profile
| PlantPEAD ID: PlantPEAD00379 | Uniprot ID: Q8RP13 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. maculicola strain ES4326 | Other name: |
| Gene name: HopPmaD | NCBI Gene ID: AF458043 | |
| Entry name: Q8RP13_PSEYM | Protein name: HopZ1 | |
| DOI: 10.1126/science.295.5560.1722 | ||
Gene/Protein information
Gene sequence:
CTGCTTTGCCTTGGCTTTTGCCCGGCTCGCCCGTTTACCTTTTTGGTCTCTGACGCCATGTGTAAGCCTGTGCTGAGGAGGTATCGACTCAATTTCGGCTATGATAACCGATTTCAAAATCCCACTTTCTTTCTAATCAGTAACGTTTTTTAAAGTGGAACCTGGCAAGCGTGATGCACCACTCATCACCGTGAATAACCTTACCTTCAGGAGGAGTTGCAAGATGGGAAATATATGCATCGGCGGCCCCCGAATGTCGCAGCAGGTTTACTCCCCTGAGCGCGCGGATACACCGCAGCGTAACGCCCTTCGCGAGCAAACAGAGGCAGACATTGAGCAAAACAGCGAAAGCATGCGACTTCAGCAGAAGATAGATGATTTGAAGCCCTATGTGAGTAACGCCACAGGGCCGATGAAGGCTTATGGCCAAGCCGCTATGGACCGCGCATCAGGCAAGAAGACATATGTAAGTTTTGCAGAGCTCGACGCAGAGCATCTGGATGCGATGGTGGACGTCGAGAACCAACGCAATCCCGACCTCAACCTTAGGTACTTCAAACACCATAAAGAATTCATTCAGGCACTTGAAAGCGATGGCCCCAGCTCGTTTCGGGCGATATATCCATTGACTAAACCTAGAACCGGACAGGCAGCCAAGCACCACGTAATGGCGGATGTACGCCTGACTCCATGCGAACCTCCGTCCATCGTAATCACTGAGCCCGGCGTCATTGTAGGCAAACGCAATAAACAGCTTCACCGACACAACCAGACCCTGGAGGACTTAAGCGAAAGCGGCGTACAACTCTCGCAGGTGGCAATCATCGAAACACAGGCACAAAAAACGCCGGACGACTGCGTTATGTACTGCCTGAATTACGCAATTAAAGCCCATAAAAATGCTGATAAATTTGACGACATTCATCATGGCCTTCAGCGTGGCACCTTTGTTAACCGAATCAATGGAAGGCGAGTCCAGGACGCGGACCACTGCGGGCACTTTTGAAGAAGAGACTCGATATCCGGTAGTGGAAGGCGATACCCATGTCGCATTTGGCGCTGACGTTCTGCCGGTTGACTTCTATAAGCACGGAGCATCGTTTACA
Protein sequence:
MGNICIGGPRMSQQVYSPERADTPQRNALREQTEADIEQNSESMRLQQKIDDLKPYVSNATGPMKAYGQAAMDRASGKKTYVSFAELDAEHLDAMVDVENQRNPDLNLRYFKHHKEFIQALESDGPSSFRAIYPLTKPRTGQAAKHHVMADVRLTPCEPPSIVITEPGVIVGKRNKQLHRHNQTLEDLSESGVQLSQVAIIETQAQKTPDDCVMYCLNYAIKAHKNADKFDDIHHGLQRGTFVNRINGRRVQDADHCGHF
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 29276.9 | 260 | 6.63 | -0.727 | 39.36 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR005083
Pfam: PF03421
SMART:
KEGG:
PRINTS: