Effector profile
PlantPEAD ID: PlantPEAD00380 Uniprot ID: Q4ZPS9 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. syringae strain B728a Other name:
Gene name: HopAF1 NCBI Gene ID: CP000075
Entry name: Q4ZPS9_PSEU2 Protein name: Type III effector HopAF1
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGGGACTATGTATTTCAAAACATTCTGGCAGCAGCTACAGCTACAGTGATAGCGACCGCTGGGAAGTGCCTGTAAACCCTTCAAACGTCAGGTCTGCATCCAGTCATCAAACGGTATCTGCGAGCGATAGAGCCTCAGACAAGGTGGACGAACGTCCTGCAACATTTTCTCATTTTCAACTCGCGCGGTGCGGCGAAGATTATACTCTTAGCATGGTTTCTTTAGCAGCTTATCAAGCAGAAAGACGGCATCGCGGTAATTTAATAAAGGATCGTAGTCAATCCGCACTTCCCTGGGTGCAGGTATATCACTCTGAAACAGGCCTGGACTACAGTTTCCAGATTGACAGAACCACGACTGTCAAAGTGGCCGGATTCAACTACAATGTCCCCAATGATGGAGAGACTCGGCATTTATACAGTGCCGGCACGAGCCAGGTAAATATGCCTGTCATCACAGACAACATGAGTGCGTGCATTGCTGTCGCGTGTGCGGCGGAAAACGTAGATGCCGGCACGGGTGAACGTAGGCCGGGGGCGAAAGTTCGCGTATTCCATCTACTCCCTTTTCGTCGCGAAGACCTTATGCCAGAACAAGTTTTAGCCTCTGTGCGCGATTATCTGCGGGATATTAAGGAACAGGGGCTAACAATGCGCGTAGCCCTGCATGGAGGAAATAGAGAGGGTGATTTCTCAGTCAGCACTGCGGAGGCATTGAAAAGCCTGTTTGCTGATGAAGGAATCCCGATTGAATTCGACGAAACTTGTGCAAACCGAACATCTGAAACACTGCTTGGCGCCGTTATTCTTAATGACAACTCGACTCAATTCATAAAGCATTTGGTCGCTTTATGA
Protein sequence:
MGLCISKHSGSSYSYSDSDRWEVPVNPSNVRSASSHQTVSASDRASDKVDERPATFSHFQLARCGEDYTLSMVSLAAYQAERRHRGNLIKDRSQSALPWVQVYHSETGLDYSFQIDRTTTVKVAGFNYNVPNDGETRHLYSAGTSQVNMPVITDNMSACIAVACAAENVDAGTGERRPGAKVRVFHLLPFRREDLMPEQVLASVRDYLRDIKEQGLTMRVALHGGNREGDFSVSTAEALKSLFADEGIPIEFDETCANRTSETLLGAVILNDNSTQFIKHLVAL
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
31340.9 284 5.72 -0.385 39.48
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana Disease name: Bacterial speck
Host classification: Eudicots NCBI Species: 4081, 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q9T0I8
5'-methylthioadenosine nucleosidase
MTN1
Arabidopsis thaliana (related: thale cress)
MAPHGDGLSDIEEPEVDAQSEILRPISSVVFVIAMQAEALPLVNKFGLSETTDSPLGKGLPWVLYHGVHKDLRINVVCPGRDAALGIDSVGTVPASLITFASIQALKPDIIINAGTCGGFKVKGANIGDVFLVSDVVFHDRRIPIPMFDLYGVGLRQAFSTPNLLKELNLKIGRLSTGDSLDMSTQDETLIIANDATLKDMEGAAVAYVADLLKIPVVFLKAVTDLVDGDKPTAEEFLQNLTVVTAALEGTATKVINFINGRNLSDL