Effector profile
| PlantPEAD ID: PlantPEAD00381 | Uniprot ID: A0A0N8SZV2 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. syringae strain B728a | Other name: |
| Gene name: HopAI1 | NCBI Gene ID: LJRK01000003 | |
| Entry name: A0A0N8SZV2_PSESY | Protein name: Type III secretion system effector HopAI1 | |
| DOI: 10.3389/fpls.2018.00977 | ||
Gene/Protein information
Gene sequence:
ATGCCTATCAACAGACCCGCCTTCAATTTAAAACTCAATACGGCCATTGCCCAGCCGACTTTGAAGAAGGATGCAGGTGCGGAATTGCGCCGTTTGAATCAGAGCGAAGTGCGTGCCAACACACAGACACGTTTTGCCGTTAATCACCGTGCCCCCACTTATGACGTCGCGCAAAGCGCGCTGGGTGAAAATCACGGTGGCTGGACTGCCGCCAATCATTTCAAGATGACGGGGTCTGAGGTCTTCATCCATATGGATCGCCTGGAGCCGAACTGCAAGGGGGAGTTTGCCGGAGACAAGATCCACCTCAGCGTTGCACCTGAGGATGTACCGGATGCATTCAATGCGATAGGCAAAATACTGCAGGCGAGCGACAGCCCGGTTGACTCGTGGAAAGTGACTGACATGAAATGCCTGCAAGCAGAGATGCCGGCGGCAAAGCAGCGCGTGGCGCTGGGCGCTCAGTTCACGATCTACGCCAAGCCCGACCGTGAAGACAACACCTACAGCCCAGAGTACATGGGCAAAATGAGGGGGATGATCAGCAGTATCGAACAGGAGCTGAGCGCCGCCGGTGTAAGGCAGAGCAGCCATCGCCCGGACTCCGATGTCTCCCCGGGGCACTGGAGCTATGCGTCTTATCGCAATGAGCATAAAAGCAACAGATCAGGGACTTCCAATCAGCACAGGAACCTGGAGGCCGAGCCTTTTTTCCAGTTGGTCTCATTCTCTGACGGGGCTTCAGGGTCATCCAGGTCCAGCGCTGACCATCAGGCCTTGCTGCCGCCGCCGTGGGCCCGGTAA
Protein sequence:
MPINRPAFNLKLNTAIAQPTLKKDAGAELRRLNQSEVRANTQTRFAVNHRAPTYDVAQSALGENHGGWTAANHFKMTGSEVFIHMDRLEPNCKGEFAGDKIHLSVAPEDVPDAFNAIGKILQASDSPVDSWKVTDMKCLQAEMPAAKQRVALGAQFTIYAKPDREDNTYSPEYMGKMRGMISSIEQELSAAGVRQSSHRPDSDVSPGHWSYASYRNEHKSNRSGTSNQHRNLEAEPFFQLVSFSDGASGSSRSSADHQALLPPPWAR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 29451.8 | 267 | 7.17 | -0.677 | 54.33 |
Plant infestation information
| Experimental plant: Phaseolus vulgaris (related: kidney bean) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR003519,IPR038498
Pfam: PF03536
SMART:
KEGG:
PRINTS: