Effector profile
| PlantPEAD ID: PlantPEAD00382 | Uniprot ID: Q4ZX48 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. syringae strain B728a | Other name: |
| Gene name: HopX1 | NCBI Gene ID: CP000075 | |
| Entry name: Q4ZX48_PSEU2 | Protein name: Type III effector HopX1 | |
| DOI: 10.3389/fpls.2018.00977 | ||
Gene/Protein information
Gene sequence:
ATGAGAATTCACAGTTCCGGTCATGGCATCTCCGGACCAGTATCCTCTGCAGAAACCGTTGAAAAGGCCGTGCAATCATCGGCCCAAGCGCAGAATGAAGCGTCTCACAGCGGTCCATCAGAACATCCTGAATCCCGCTCCTGTCAGGCACGCCCGAACTACCCTTATTCGTCAGTCAAAACACGGTTACCCCCTGTTGCGTCTGCAGGGCAGTCGCTGTCTGAGACACCCTCTTCATTGCCTGGCTACCTGCTGTTACGTCGGCTTGATCGTCGTCCGCTGGACCAGGACGCAATAAAGGGGCTTATTCCTGCTGATGAAGCAGTGGGCGAAGCGCGCCGCGCGTTGCCCTTCGGCAGGGGCAACATTGATGTGGATGCGCAACGCTCCAACCTGGAAAGCGGGGCCCGCACGCTCGCCGCAAGACGCCTGAGAAAAGACGCCGAGACGGCGGGTCATGAGCCGATGCCCGAGAACGAAGACATGAACTGGCATGTGCTGGTTGCCATGTCGGGTCAGGTGTTCGGGGCTGGCAACTGTGGCGAACATGCCCGTATAGCGAGCTTTGCCTACGGTGCATCGGCTCAGGAAAAAGGACGCGCTGGCGATGAAAATATTCATCTGGCTGCGCAGAGCGGGGAAGATCATGTCTGGGCTGAAACGGATGATTCCAGCGCTGGCTCTTCGCCTATTGTCATGGACCCCTGGTCAAACGGTCCTGCCGTTTTTGCAGAGGACAGTCGGTTTGCTAAAGATAGGCGCGCGGTAGAGCGAACGGATTCGTTCACGCTTTCAACCGCTGCCAAAGCAGGCAAGATTACACGAGAGACAGCCGAGAAGGCGCTGACCCAAGCGACCAGCCGTTTGCAGCAACGTCTTGCTGATCAGCAGGCGCAAGTCTCGCCGGTTGAAGGTGGTCGCTATCGGCAAGAAAACTCGGTGCTTGATGATGCGTTCGCCCGACGAGTCAGTGACATGTTGAACAATGCCGATCCACGGCGTGCATTGCAGGTGGAAATCGAGGCGTCCGGAGTTGCAATGTCGCTGGGTGCCCAAGGCGTCAAGACGGTCGTCCGACAGGCGCCAAAAGTGGTCAGGCAAGCCAGAGGCGTCGCATCTGCTAAAGGTATGTCTCCGCGAGCAACCTGA
Protein sequence:
MRIHSSGHGISGPVSSAETVEKAVQSSAQAQNEASHSGPSEHPESRSCQARPNYPYSSVKTRLPPVASAGQSLSETPSSLPGYLLLRRLDRRPLDQDAIKGLIPADEAVGEARRALPFGRGNIDVDAQRSNLESGARTLAARRLRKDAETAGHEPMPENEDMNWHVLVAMSGQVFGAGNCGEHARIASFAYGASAQEKGRAGDENIHLAAQSGEDHVWAETDDSSAGSSPIVMDPWSNGPAVFAEDSRFAKDRRAVERTDSFTLSTAAKAGKITRETAEKALTQATSRLQQRLADQQAQVSPVEGGRYRQENSVLDDAFARRVSDMLNNADPRRALQVEIEASGVAMSLGAQGVKTVVRQAPKVVRQARGVASAKGMSPRAT
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40810.2 | 382 | 7.15 | -0.604 | 55.72 |
Plant infestation information
| Experimental plant: Phaseolus vulgaris (related: kidney bean) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: psb:Psyr_1220
PRINTS: