Effector profile
PlantPEAD ID: PlantPEAD00383 Uniprot ID: Q4ZV89 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. syringae strain B728a Other name:
Gene name: HopH1 NCBI Gene ID: CP000075
Entry name: Q4ZV89_PSEU2 Protein name: Type III effector HopH1
DOI: 10.1126/science.1203659; 10.3389/fpls.2018.00977
Gene/Protein information
Gene sequence:
ATGATCACTCCGTCTCGATACCCAGGCATCTATATCGCCCCCCTCAGTAGCGAACCGACAGCAGCTCACACATTCAAAGAACAGGCAGAGAAAGCGCTTGACCATATCAGCGCCGGCCCCTCTGGCCGTGAGCTGTTACAAGAAATATCCAAGCTTGCCAGTAAAAAAGATAGAAAAGTCACCCTTAAAGAGATTGAAATAAATAACCAATGTTATACCGATGCTGTTCTGAGCAGGAGGCAACTGGAAAAGTACGAACCCGAAGACTTTAACGAGAATCGGCGCATTGCATCACGGCTATCACGAAAGGGGACCTTTACCAAAGGTGAAGGAAGCAATGCGATTATTGGCTGGTCACCAGACAAAGCAAGCATACGCTTAAATCAGAATGGCTCACCGTTACGCCTTGGAATGGATAACGACGACAAAATCACGACCTTGGCTCATGAGCTAGTTCATGTTCGACACGTGTTGAGTGGGAGTTCCTTAGCGGATGACGGAGATCGCTATAATCCACGTACGGGATCTGGCAAAGAGGAACTTAGGGCCGTTGGATTAGATAAGTACAGCTATTCACTTACAAAAGAACCGTCAGAGAACTCCATCCGAGCTGAACACGGTCTGCCTCTGCGCATGAAGTACAGGCCACATCAATAG
Protein sequence:
MITPSRYPGIYIAPLSSEPTAAHTFKEQAEKALDHISAGPSGRELLQEISKLASKKDRKVTLKEIEINNQCYTDAVLSRRQLEKYEPEDFNENRRIASRLSRKGTFTKGEGSNAIIGWSPDKASIRLNQNGSPLRLGMDNDDKITTLAHELVHVRHVLSGSSLADDGDRYNPRTGSGKEELRAVGLDKYSYSLTKEPSENSIRAEHGLPLRMKYRPHQ
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
24442.4 218 9.06 -0.833 39.06
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana Disease name: Bacterial speck
Host classification: Eudicots NCBI Species: 4081, 3702
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
P33077
Auxin-responsive protein IAA4
IAA4
Arabidopsis thaliana (related: thale cress)
MEKVDVYDELVNLKATELRLGLPGTEETVSCGKSNKRVLPEATEKEIESTGKTETASPPKAQIVGWPPVRSYRKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKFSVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGLGCGGL