Effector profile
| PlantPEAD ID: PlantPEAD00393 | Uniprot ID: A0A063CBJ7 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 1159556 | Pathogen type: Fungi |
| Species: Ustilaginoidea virens | Strain: P1 | Other name: Rice false smut fungus, Villosiclava virens |
| Gene name: SCRE2 | NCBI Gene ID: BBTG02000020 | |
| Entry name: SCRE2_USTVR | Protein name: Secreted cysteine-rich effector 2 | |
| DOI: 10.3389/fmicb.2019.00845 | ||
Gene/Protein information
Gene sequence:
ATGCTCATCAACGCCGCCCGCTTGCTCCTCCCAGCCGCCGCTCTCGTCCACCTCAGCTTGGCCTGGGCCACGAGCGACCGCTGCAACGGCTACTCATCGACGCTGATCCAGATCAAGCACGCGGGCGACATTTACAAGCAGCCCTCCGTTCCGGGTCTCCCGCCGCCAGGGGTGAATCCATACAGCTTGATCGACACGCTCCTCAAGAACGGAGAGGACTGGTGCAAGCACTGCGCGAGCCCGCGCGTTTCGGTCGACGCCGGCCGCTACAAAGCGCAGATGGACAAGCTGCTCTCGTATGCGCATCCCTACTCCGCTAGCTCCTGGGACAGCGTGCAGTCTCTCGGCGATGCCTTGGAACACTTGTGCAAGGCAAGCCGGAAAGAAAATTAG
Protein sequence:
MLINAARLLLPAAALVHLSLAWATSDRCNGYSSTLIQIKHAGDIYKQPSVPGLPPPGVNPYSLIDTLLKNGEDWCKHCASPRVSVDAGRYKAQMDKLLSYAHPYSASSWDSVQSLGDALEHLCKASRKEN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 14147.2 | 130 | 8.36 | -0.218 | 26.54 |
Plant infestation information
| Experimental plant: Oryza sativa (related: rice) | |
| Susceptible plant: Oryza sativa | Disease name: Rice false smut |
| Host classification: Monocots | NCBI Species: 4530 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: