Effector profile
PlantPEAD ID: PlantPEAD00394 Uniprot ID: Q48G35 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 317 Pathogen type: Bacteria
Species: Pseudomonas syringae Strain: pv. phaseolicola strain 1448A / Race 6 Other name: Pseudomonas savastanoi pv. phaseolicola
Gene name: HopF3 NCBI Gene ID: CP000058
Entry name: Q48G35_PSE14 Protein name: Type III effector HopF3
DOI: 10.1126/science.1203659
Gene/Protein information
Gene sequence:
ATGGGCATATGTGCATCATCCAGTCGCAACCAATATAGTCCAGCAGTATCTAATACCTGTTCACCTCAGCATGTCGCGTCGCACGGAAACCTAGCCAGCAGCGGCGGAAATCGTATTACGTCTGTAGACCAGCTAAACTCTACTGAGCGTAAACGGTTTTTAGAACGGCAAGATCCTATGCGCATGTTTAATTTCAAAAAAGATACGCCGGTTTACCGAACGATGTCACCTGAGTTTCTTGTCGACGGCAGGGTAAGCGGTAACCCCATTTCAAGGACATGGGTTCGTGATCATGAGAGTCTGAGGCCAAATCCAAATGGCGGCTTCCCTGAAGGGACCTCAAATGCGTATTGGCCAGTTATTCGTGAGGCTCGTGACCTAGGCCCCTCATTGAACGTAATGACAGGTGGGCCTTCATATAGTCGCGATGGGGATATCAATGTTCGGATGCGGCTAGGTGATTTTATTGATCGAGGCGGGAAAGTTTATCTTGATAATTCTGCTGCCGGGGGAGATAGACAAAAAACGATCCCGTTAGTCATCACTCTACCTGAAGGACAAAGCGTGCCAGCTGAAAAGATTGTAAGCGCCTCATGA
Protein sequence:
MGICASSSRNQYSPAVSNTCSPQHVASHGNLASSGGNRITSVDQLNSTERKRFLERQDPMRMFNFKKDTPVYRTMSPEFLVDGRVSGNPISRTWVRDHESLRPNPNGGFPEGTSNAYWPVIREARDLGPSLNVMTGGPSYSRDGDINVRMRLGDFIDRGGKVYLDNSAAGGDRQKTIPLVITLPEGQSVPAEKIVSAS
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
21657.2 198 9.26 -0.624 34.26
Plant infestation information
Experimental plant: Arabidopsis thaliana (related: thale cress)
Susceptible plant: Phaseolus vulgaris Disease name: Halo blight of bean
Host classification: Eudicots NCBI Species: 3885
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
Q9SJ85
BTB/POZ domain-containing protein At2g04740
Arabidopsis thaliana (related: thale cress)
MSPIENSSSWTLESDLEDLDLDLQDYKPSVPLKKVPNGDIFEASRAGDVDRLRYLVETGVNVNARDRWDSVALYYACLAGHIDSARLLLENGAICSEHTFDGDRCHYASLNLRIRKLLKAFEARPPPLAPLQASLRDTFLGCCHNRDYLQQEEANLDVSDTLSEFGSSNYFPPDVMFYVQGRPIEAHRVILSARSPFFKQKFENEWKDRREVRFSKEKLSYPALCSLIHFFYSDRLEISVDDMEDLVRICKVCKCESLQKIIEKELIHQRYAEYKTHRDLDNSMKRFILQGISLPEEDRLPASLHRILRVSLAKSFVGDVIDSSVGDTRVGDSVESLADVCVRVDKRNFYCHQVILASRSEYFRARLSRVNDFHEGKNGLPGDTLPFLEEHDLSAEAFEKMIEYMYTDGLKEINPNQAEEIFDVASRYLLFPLKRAVADALLPHLETATPAELCQWLVLSDMYGVLKIREYCLDLVACNFEAFVETHEFRAMLLTLPPPSGDSSLRTTVPSAPGAMMTTDQGNLLDDLREKWLEAEALELDMRDESALIFDKRLAMLVEIAEREKSESEAEDYKDTSA
Q8LAZ7
COP9 signalosome complex subunit 5a
CSN5A
Arabidopsis thaliana (related: thale cress)
MEGSSSAIARKTWELENNILPVEPTDSASDSIFHYDDASQAKIQQEKPWASDPNYFKRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGDTIIVMDAFALPVEGTETRVNAQSDAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGHKISDDHVSEYQTIPLNKIEDFGVHCKQYYSLDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAESQLANSRYGGIAPAGHQRRKEDEPQLAKITRDSAKITVEQVHGLMSQVIKDILFNSARQSKKSADDSSDPEPMITS