Effector profile
| PlantPEAD ID: PlantPEAD00396 | Uniprot ID: Q700W1 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: GMI1000 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: PopP1 | NCBI Gene ID: AB302267 | |
| Entry name: Q700W1_RALSL | Protein name: Avirulence protein AvrRxv | |
| DOI: 10.1094/MPMI.2002.15.10.1058 | ||
Gene/Protein information
Gene sequence:
ATGAGAAGACTATTTAGAGCATTGGGCGTCAGTCAACCGACTAGGACGTATACACCCACAACGGACACAACCTCCCCCGCAGCTGCAACGCCGGAGAGTTCACGCAATTCGTCCCCGGAGAGCTCGCGAAGCCCATCTCCGGTCCGTTCTCGTTCTCGCAATCATCCTGACCTGAGCGAGTTGCCGAGCCGACCTCGCAGGAAAGCGGAAGCGCTGGCCGAGTCAATCCAGAGCGCACGCGAAAGGGGGGTGGATCCCGAGTTCATTGCCTACGCGGAGACAACGCTGAGCAACCTCGCGAGCCATACTCAGCCGTCCGTCATGGAAACCAATCTGGACATCCGGCACCTCGACACCATCGTGCGGTCCTACCGGTACAACAACCTGAACCTCGAGGCGTTCAATTCGAAGGATGCGTTTGTGGCATCCCTCGTTGCAGGACAGGGCTCGGGACGGGCAGAGCGTGCTGTGGTGCGAGACTACCCGAACCTTCACCACTTCGCAGCAGATGTCCGGCATCACGAAGATGGGCGAACCACTGTCATTATCTTGGAGCCGGCCTCAGCGGGTAATCAGGAAAATTTGCCGGGCTATACCGAGCTAGCGAGTGCGCTGAGGTATAACCTCGGCTCCCAATGCAGGATGGTCGTGATCGAAGCAGAGGCGCAAAAGTCCCTTTCAGACTGTGTTGCCTTTGCACTGGATTTTGCGCTTGTTGCTTATCAGGAGCGCAGGACGACTTTCGATCAGTGGCATGAGAACTTGGCCGCGTACGGGACCATCGCTGACAACGGTGTTCAGGATAAAAAGTACGGTCCTTTTGATCGGGGGCTCTACCGCAACCAGGGTATCTATCTGATTAAGGGGTGGGGCGTGCTTCCACCCGTGTTCTACAAGCATGCGCACTCCTCTGAGACGCTTAAAGGAGTCGAGAAAAGACAACCTGGCAGCCTGGAAACGGACGTTAGTACTGGTAGCAACAAGGATGGGGCAGAGTCTCTGGAAGAACGTATGGAGGCGTTCTCTGACAGGCATGGCTTCAGACCTCGTAATATCTCGATCGAGGCATCAAGAGCGCGAAAAATTCGACATGCCCTGGAGTCGTGA
Protein sequence:
MRRLFRALGVSQPTRTYTPTTDTTSPAAATPESSRNSSPESSRSPSPVRSRSRNHPDLSELPSRPRRKAEALAESIQSARERGVDPEFIAYAETTLSNLASHTQPSVMETNLDIRHLDTIVRSYRYNNLNLEAFNSKDAFVASLVAGQGSGRAERAVVRDYPNLHHFAADVRHHEDGRTTVIILEPASAGNQENLPGYTELASALRYNLGSQCRMVVIEAEAQKSLSDCVAFALDFALVAYQERRTTFDQWHENLAAYGTIADNGVQDKKYGPFDRGLYRNQGIYLIKGWGVLPPVFYKHAHSSETLKGVEKRQPGSLETDVSTGSNKDGAESLEERMEAFSDRHGFRPRNISIEASRARKIRHALES
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 40961.5 | 368 | 7.85 | -0.661 | 51.6 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana (related: thale cress) | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR005083
Pfam: PF03421
SMART:
KEGG:
PRINTS: