Effector profile
PlantPEAD ID: PlantPEAD00397 Uniprot ID: A0A0S4UFN8 Source: Article
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 305 Pathogen type: Bacteria
Species: Ralstonia solanacearum Strain: GMI1000 Other name: Ralstonia nicotianae, Pseudomonas solanacearum
Gene name: RipAA NCBI Gene ID: LN899821
Entry name: A0A0S4UFN8_RALSL Protein name: Type III effector protein avrA
DOI: 10.1111/mpp.12824
Gene/Protein information
Gene sequence:
TTGCACTTTTACCAATACTGCGGACCTCCCCTACTGGAAACACAGGAAATCAAGATGAGAAGAATTGGCAAAATCGGTAGCCAAGTCGGCAACTTTTTGAAAGGGAATTCACGTTCGTCAGGATCCTCCCGCGGCCGGACGCAGGAATGGGACGAAGGCTCCTCCAGGCGACCCGCCCGTTCTCCGAGCCCTGAGTTTTCGAATCTGCGCAGCCGGTCCAGCAGTGCGGCCAGTAGTGTGGCCAGCTCGCCTGCAGTCAGTCGGTCCAGCAGTGCAACCAACTCACCCGTGCGCAGCCGGCCCATCAGTACGGTCGCTTCGCCGACGCGGTTCGATGCGAACGGCAGGGTCACGGACCCAGGCCATATCCAGTACCAGACTTCGGACTGGGAACGCGAGCAGTACGGGCTGAGCGAGGCCCTCGGCCACTCGCGGTATACCGGTCCCGGTTCTCCCCGGCCGGAGCGCTTCCCGGTCAGCGGGTATCTTCAGGACGGCCGGCCTTTCAACGTGCCCGGGATCAGAGGGCCGGCCATCAACGCAGGCGACGACCATGTGATCGATCGTCGATACGCGAGCCATGTGATCGACCATGGCGAAATGTCCTACGACCAGGCTGCCCGGTACATGGAGCAGCAGAGCCGGCCGGTCTTTCCCACCTACGAGACGAGCGGTTACGACCAAAGCAATTGCGTGCACGCTCACTCCTACCTGGGCGAGCGCCTTTTCAGGTGGGACATCCCACTGTTAACGCGCGCGCAGAATNNN
Protein sequence:
MHFYQYCGPPLLETQEIKMRRIGKIGSQVGNFLKGNSRSSGSSRGRTQEWDEGSSRRPARSPSPEFSNLRSRSSSAASSVASSPAVSRSSSATNSPVRSRPISTVASPTRFDANGRVTDPGHIQYQTSDWEREQYGLSEALGHSRYTGPGSPRPERFPVSGYLQDGRPFNVPGIRGPAINAGDDHVIDRRYASHVIDHGEMSYDQAARYMEQQSRPVFPTYETSGYDQSNCVHAHSYLGERLFRWDIPLLTRAQNX
Protein structure:
NONE
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
28483.5 256 9.47 -0.875 77.76
Plant infestation information
Experimental plant: Nicotiana benthamiana (no common name found)
Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum Disease name: Bacterial wilt
Host classification: Eudicots NCBI Species: 4111, 4081, 4113
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.