Effector profile
| PlantPEAD ID: PlantPEAD00400 | Uniprot ID: A0A2S1GUJ8 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: GMI1000 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: RipAX2 | NCBI Gene ID: MF055737 | |
| Entry name: A0A2S1GUJ8_RALSL | Protein name: Type III effector | |
| DOI: 10.1111/mpp.12724 | ||
Gene/Protein information
Gene sequence:
ATGCTTATACAGACACAGTACCCTGGGTTTTACATTGCAACCGCAAGTGACAATCAACGCGAAGCTGACCGTTATGCGGGCAAAGTAAACGAGGCGTTAGGGAAAATTGCGTCCGGGCGCTCGGGGGGCGAACTGCTTCGCGGTATCAGCTCTCTGAGTGCGACCAGACAGCGCAAGCTGACCATCAGCGAGATCGACTCCGATGACGACCCCTGTACGGAGGCCGTCCTCACCAGGCCACAGATTGCAGCGTATGATCCGTCGGATTTTCGAGCCAACAAGAGAATCGCCAAACAGTTCGCGCGAGGAGAAGTCTCCTCGGAACCCTCAGGCTGCAGCGCGATCGTGAACTGGAACCCCAAGACCAGCATCAAGCTGAGCCGAAACGGCTCGCCGAAGCGCCTGCATAAAGACCCCAGCGAATCGTTCGCCGTCCTCGCCCACGAACTGATCCATGCCCGCCACATCATGGCAGGGACATCCAAAGCCTGGAGCGGCGACCGTTACAACGAAACCAGCGAGGCAGGCCAGGAAGAGCTGAGGGCGGTTGGCTTGGGGGCCTACGCACACGCCTACACCGGTGAACCGACGGAAAACTCCATCCGTGCGGAACAGGGCTTGCAGGCACGCAGCAAGTACAAGCCACGCAACGCATAA
Protein sequence:
MLIQTQYPGFYIATASDNQREADRYAGKVNEALGKIASGRSGGELLRGISSLSATRQRKLTISEIDSDDDPCTEAVLTRPQIAAYDPSDFRANKRIAKQFARGEVSSEPSGCSAIVNWNPKTSIKLSRNGSPKRLHKDPSESFAVLAHELIHARHIMAGTSKAWSGDRYNETSEAGQEELRAVGLGAYAHAYTGEPTENSIRAEQGLQARSKYKPRNA
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23810.5 | 218 | 9.03 | -0.704 | 45.67 |
Plant infestation information
| Experimental plant: Solanum melongena (related: eggplant) | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR028208
Pfam: PF14891
SMART:
KEGG:
PRINTS: