Effector profile
| PlantPEAD ID: PlantPEAD00404 | Uniprot ID: Q3BYG1 | Source: Article |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 339 | Pathogen type: Bacteria |
| Species: Xanthomonas campestris | Strain: pv. campestris | Other name: |
| Gene name: AvrRxv | NCBI Gene ID: AM039952 | |
| Entry name: Q3BYG1_XANC5 | Protein name: Avirulence protein AvrRxv | |
| DOI: 10.1094/mpmi-6-616 | ||
Gene/Protein information
Gene sequence:
ATGTGCGACTCCATAAGAGTGCAATTCAGATCCATACAAAAAATGGTGGTAAAAATGAAGAAATTTTTCAGATCATTAGGAGTGGGCGGCTCAAGCAGCAGTCGTTTTCAACATCATATTCCGGAGGCTGACTCAGCACCCAGTAGTAAGGCGTCTACGCCTCCGGCCTCTCCGCCGCCGGATTCCCCGCCCAGTAACTCTGCTTTTTCCGCTCTCCCGACAAGGCCTCGCAAGAAGGCCGAGGCCTTGTCGGATGCGGTGGAGTCGCGCGGACATTTAGCCCCGCCAAGCCTGGTCTCCTATGCCAACGCAACCCTTGATCAACTGAGGCGAAATGAACCCATCAGCGAGTCACTTCGGCTGATGGACATTGAAAATCTCCCCCATCTGGTCCGCTCCTACGACAATAGATTGAATAATCTAAACCTGCGCAGCTTCGACACTCCGGGGCAGTTTTTACATGACCTGAGTCGCTGGCATAAAACAGGATTGCCATTAAGAGCGGTAGTGCGGCTGGATGAAGACCCTAGGAGATGGCATCGCGTCGCGTTCGACGTGCGCAACCACGAGAGTGGACACACGACGATTATCGCATTGGAGCCTGCGTCTGCTTACAATCCGGACCATATGCCTGGTTTCGTGAAAATGAGAGAAAATCTCACGTCTCAGTTCGGTAGGAAAATTTCGTTTGCTGTGATTGAGGCGGAAGCACTTAAGTCAATCGGTGGGTGTGTCATATTTTCTCTTGATTATGCCCTGGCGGCATACCAGGAAAGAAGCACCTTTGACCAATGGCATAAAGATCTTCGAAAGAAAGGAAATATCAAGGGGATGACTCCCGAAAGTCAGCACCTTAACGAGCTTGGCGTCTATTTGCTTAAAGGAACCAGGTTGCTGCCGGCAAACTTCTACAAGCATGCGCATTCCAGGCGCACCATCGACGAGCTCGAGGCAGATCAGCCTGGCGCGTCGGGTACCGACGTGAGGTCAGGCAGAGCCGCTGTCTACAAGGAGTCGCTGAGCCGTAGACTGGAGGAGTTCCAGGTCCAGCGCGATAAGACCTACAGCATGTCAATCGAAGCATCCAGAGCTCGAAAGATCCGTCACGCCTTAGAATCCTGA
Protein sequence:
MCDSIRVQFRSIQKMVVKMKKFFRSLGVGGSSSSRFQHHIPEADSAPSSKASTPPASPPPDSPPSNSAFSALPTRPRKKAEALSDAVESRGHLAPPSLVSYANATLDQLRRNEPISESLRLMDIENLPHLVRSYDNRLNNLNLRSFDTPGQFLHDLSRWHKTGLPLRAVVRLDEDPRRWHRVAFDVRNHESGHTTIIALEPASAYNPDHMPGFVKMRENLTSQFGRKISFAVIEAEALKSIGGCVIFSLDYALAAYQERSTFDQWHKDLRKKGNIKGMTPESQHLNELGVYLLKGTRLLPANFYKHAHSRRTIDELEADQPGASGTDVRSGRAAVYKESLSRRLEEFQVQRDKTYSMSIEASRARKIRHALES
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 42020.6 | 373 | 9.73 | -0.614 | 68.59 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum lycopersicum, Arabidopsis thaliana | Disease name: Bacterial speck |
| Host classification: Eudicots | NCBI Species: 4081, 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR005083
Pfam: PF03421
SMART:
KEGG: xcv:XCV0471
PRINTS: