Effector profile
PlantPEAD ID: PlantPEAD00421 Uniprot ID: D0N8M0 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 4787 Pathogen type: Oomycota
Species: Phytophthora infestans Strain: strain T30-4 Other name: Potato late blight agent, Botrytis infestan
Gene name: Avrsmira1 (PITG_07550) NCBI Gene ID: XM_002904490
Entry name: D0N8M0_PHYIT Protein name: RxLR effector protein
DOI: 10.3389/fpls.2020.00919; 10.1111/ppa.12875
Gene/Protein information
Gene sequence:
ATGCGTCTAAGCTCCACATTTCTTGTCGCAGCAGCTGCGTTGCTCGTGCTCAGCGATGTAGTATCAGCTGCAACTGTGACCAAGGTATCGGCCATGAACGTGCCGAATGTGGCGAAGCCGGTGGAAGTTGCTCCTGTGAAAGACGCAAGGCTCCTGCGAAGCGAAAGCCGGAAACAAACCGATGTGGAAGACTTTGAAGACGAAGAGCGGAAGATTCAGACAAGCTTAATCGACGATGCGTTTAAGGGGCTCGGAAGAACCGACGACGCTGCAAAAAAACTACTCGCAAACGATGATGCAATGGCGAAGAAGCTGGCCGCTCTTAACAAACAACAAGGCGAAGCTGACAATGCCAAGTTTCTCGCTAACTTGTGGATGAGACAAAATATGAAACCGGAGGATCTACGATTGCTCACGAAAACCCCGGTCAACAAGAAGGCCTACCAGGAGTTCCTTGTCCAGTATATGAAAAAGCATCATTCGCTGAAACCTGGCCCCCAAGCAAACCGAAAGATTACCAGGGAGGGCGCTCAAATCCTGCGCAAAATTGAGAACGCGGACGACGATGTCAAATTCCTCGTGAACCTCTGGATTAAGCAAAAGAAAACCCCTGAGGACCTACGACATATCACCAAGAACGAGGTTTCAAAGCAAGCGTACAACTTGTTCAACGCGCAATATCTGACCAAGCGCCACTCGCTAAACCCCTCCGGATAA
Protein sequence:
MRLSSTFLVAAAALLVLSDVVSAATVTKVSAMNVPNVAKPVEVAPVKDARLLRSESRKQTDVEDFEDEERKIQTSLIDDAFKGLGRTDDAAKKLLANDDAMAKKLAALNKQQGEADNAKFLANLWMRQNMKPEDLRLLTKTPVNKKAYQEFLVQYMKKHHSLKPGPQANRKITREGAQILRKIENADDDVKFLVNLWIKQKKTPEDLRHITKNEVSKQAYNLFNAQYLTKRHSLNPSG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
26838.9 238 9.65 -0.574 43.28
Plant infestation information
Experimental plant: Solanum tuberosum (related: potato)
Susceptible plant: Solanum lycopersicum, Solanum tuberosum Disease name: Late blight
Host classification: Eudicots NCBI Species: 4081, 4113
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.