Effector profile
PlantPEAD ID: PlantPEAD00426 Uniprot ID: Q8XTZ4 Source: Database
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 305 Pathogen type: Bacteria
Species: Ralstonia solanacearum Strain: GMI1000 Other name: Ralstonia nicotianae, Pseudomonas solanacearum
Gene name: RSc3401 NCBI Gene ID: AL646052
Entry name: Q8XTZ4_RALN1 Protein name: Probable type III effector protein (Skwp 1)
DOI: 10.1093/nar/gkab1037
Gene/Protein information
Gene sequence:
ATGCGCGCGGCGTCGCCGGGTGCGCCATGCCCATCCCGTCCATGGCCGACGCATCGCAAGGCGCCACAACTGCCGGTATGGCCGGCAGGCACCGCCAGCCATTCCCATGCGTCGCCGTCCGGCAAGCGTCCCCTTTCGCACGAAAGCGCGGGACGCCACCCCGTTTCAACGAATGCAAAGCGTGCAGGAACCATGAAATTCGATCCGAACTACCGCCACCGGCCGCCCCTCCATCTCGTCAACGCGGGAAGGGGCCATGCCCCGGCGCCGTCCAAGCCGCAAGGGCACCGCGCGCCGCGGGCCCGGGCGCTGGACCTGCCTCGCCCCGCGCGTGCGCCGGCGGGGGTGGCGCAGCAGGATCGGGCGTCGCCATCGGCTGTTGAAGGGGCGTTGTCGAAAGCGCTGAATTACCCTGAGCGCGACCTCGACAGGGAGGCGGCCATGCAGCTCGACATCCAGCGCGAGGAACAACAGTACGAACTCTGGTGCAAGAGCGGCCTCGGGTTTCCCGAGCGATGCCTCGACATGGCCCGCGACAACGTCCTGGCCGAACGCAATGGGCACGGCCGTGCGCTGGTCTTCCTGATGCCGGACAGCGATGCCGAAGCGAACATCGATCTGCTGGGGCACTATCTCGCGAAGCTGGGCGACGGCGGACCTGGCCGGGTCGATCCGGCTTTGCGCGACGGGATCCGCGCCTGCGCCGAGCTGTGCGCGGGGTACCTTGTGCACACGTCCTGGTTCGAAGGCGCGCCCGTTGCCACGTACGCGCATCTGGCGAACAAGCTGAGCAAGTTTCCGGACCGCGCCGCGTGCATGGAGGGGCTGGCGTGGATTGCCCGGCAGGTCCTGCTCGCACGGCACCTGTATCGGCTGGGTGACCGGCAGGCCACGACGCTCGTGGGCGGACTGGCGAAGAACACGCGAAGCGAAGCCTGCAGAGATGCCATCCTGCGCCTCACCGGCGGGCTGCTCGGCGACAACGCGATGCGCGGCCGCTTGAACGCCATCCAGGTCCCCATGTTGTTGAATGCGCTGAGCAAGTGGCCGACCCACGACGAGGCCAAGTCCTTCGTGTTGCAGCTGGCCGATCTCATGGCACCGCCATCGGAGCTGCTCCATGCATTGGACGGGCAAGGTGTTGCCAACAGCCTCAATGCACTGAGCAAGTGGCCGGGCGAAGCGCGGGCGGAAAAGCTGGCGCTGCGGTTGGCCAAACGGCTGGTGGCGGACCCCGATCTGCTGCTGTCGATGCGGGAGCAGGAGGTAACCAACTCGCTGAACGCATTGAGCAAATGGGCACACCGCGAAGAGGCCAAGCAGGCGATGCTGCGGCTGGCCGCGCGCCTGGCGGACGAACCGCAGCTGCGCCGGGCGGTCCAGCCGCAGGGGGTGGCTAACGCGCTGAATGCGCTGAGCAAGCTGTCGGAGGAACCGCAGGCGAAACAGACCGTCCTGCTGCTGGCGGACCGCATCGCCACCGAGCCCCGGCTGCTGCAAGCGCTGGAGGCACAAGGCGTCGCCAACGCGCTGAACGCGCTGAGCAAGTGGCCAGGCGAAACGCGGGCATTTCGGGCGGCCCATCTGCTGACGGAGCGTCTTGCCGCGGACCCGCCTCTGCGGCGGGCACTGAAAGTACAGGAATTCAAATGCACGCTGAACGCCCTGAGCAAATGGCCGCGCGAAGACGCGATGAAACACGTCGCGCTGCAGCTCGCCTCGCGCATCCCGGCGGAGCCCGGACTGCTGCCGGCCCTGGGGGCGCAGGATATTGCCAATGTGCTGAACGCGCTGTGCAAGTGGCCGGGTGCCGAGGGCGCGAAGCGGACGGTGCTGCTGCTGGCCAGACGCCTGGAGATGGAGCCTCAGCTGCGCAGTGCGTTGAGTGCCCTGGAGCTCGCCAACAGTTTGGGCGCACTGGCCAAATGGCCCGGCGAAGCGCAGATGGGTCGGACCGCCATGCAACTGGCCGAGCGGCTCATGGCGGAGCCCAAGCTGCGGCAAGCGCTGGAAGCGCAAGGCGTCGCCAATGTGCTGAATGCGCTGAGCTGGTGGTCCCATCAGGACACGGCGAAGCTGGTCGCCATGCAACTGGCGGATCGCGTGGCGGCCGAGCCCGAGTTGCTCAAGGCCATGGATCATCAACAGCTCGCCAATACGCTGAGCGCGCTGAGCAGATGGCCCGACGAACAGCGGGCCGGGCACGCCGCACGCGCGCTGGTGGCGCACCTGACGGCGGAGCCCGCCGGCCGATGGCGAGACCTGGACGCGCGGCACACCTCCAATGCGCTGTTTGCCCTGAGCAAGTGGTCCGATGAGAACTGGGCAACGCAGGTCGTGCTGCAACTGGCTGAGCGCATTGCCACGGAACCGGCCCTGCTGGACGACGCGGATGCACAAGGTGTGAGCGACGCCCTGTGCGCACTCTCCAAATGGCCGGGTGAAGACAGCGCGAGGCTGGCGACCCGCGAACTCGCCGGCCGGCTCCTCGCGGACACGGCATTGCAGGCGGCGCACGACGCGCAACGCCTGGCGAACACACTGAATGCGCTGGCGAAGTGGCAACGCGAGCCGGAAGCCATGCGGGCCTTCTGGCAGCTGTCCACCCTGCCGGGGCGGGCCAGCCACCCATGGCGGGCGTTCAATATCGTGGACATGGCCCAGATCGGCAACGCGTTCGCGCGCCTGGTCCAGGATGAAGGCGAGGATTTCGAGCGGGCCCGGACTGTTCTACAGCGCCTGGCCATCCATCTCGAATTGCATCCGGAGTGCTTCGAATGCTCGGGCTCCGGCCATATCGGCGTGCTGTTCAAGTCGTTTGCCAGTCTGAGGATGCAGCGCGAACTGCGCCCGCTGGGCACACCAGCGTTGAATCGGGTCATGACGCTGTGCCGCGAGACACAGTTGCGCGACGAACCGCTCGAGACCGTCGGCAACCTGTGCCTGGGGCTGCTGCCGCTGGCCCGCAGCCCTGAACTCGCCAGGCATCGCGTGCCGGCGTTGAAGGTCTTCGAATCCCTGCAGCCTGTCGTGGCGCGCAAGATCGACAGCTATCTGCGGCACGGCGTGCGGGCGTCTGCCGGATCGGCCCTGCGCGTGATGGACGGGCAGGAAGCCTGCGGTACGCGCGGCCCTGCCCTGACCTTCTACCAGATCCTCAAGGCGTACGCGCTTGTCGTCCGGCAATGGAAGCCCCGCTATATCCAGGGCGACCGCCAGGCGGTGCAGGCTCGGCAAGCCACCCTCAAGCAATGGGTCGACGCCACGCTGGCGCGTACGCGGGGCGTGATCGAGTCCGACCTGCAGGAGATGAGCTGGAACCTCATCGCCCAGATCGAGGCGGGCGACAACGTGCTGAACGCGCTGGACCTGCGCATCGGCAGGGAGCTGACCGCCATCACGCAGCGCCACCCGCCGACCCGCTTCGATCTGGCCGGCGCGCGCACGCGCATGCGCACCGAGCCGGGCAAGGTCCGCCCCGTGAAGGCGGGCGTCGGCGCCACCCGCCATGTCACGGTCGACCTGCAGGGGCGCGAGCTCAAGGTGGACGGCGGGGCTGAGCAGCCCTACTCGTTCTATGCTCGCCTGACCGGCCAGCCGCTGGTTGAAGTCCAGCTGCCGGGGGCGCTGAGCACCTTCATGCTGGCGCGCACCTTCCAGTACCAGGGCGAGCCCTGGCGCTTCGACCTCTTCGGCGGCAGCCGGCTGACGCGCGGGCGCATGCGGCAGGTCAAGGCCATCCTGGCGAACAACCCGCCGCTCGCCTCCGTGCTGCCGGCCATGCGGTATGCCGACAGCGCGCCCGGCAGCGCATTCATGACGTTGACGCACAAGCTGGCGCCGCAGCGCGAGGACTGGTCGCGGATGCAACGGGCGCTGCTGGAGATGGTGCCGCCCGATCATGTGGTCGAGGGCTCGCTGCGGGTGGGCTGGTTCGAGGACGTGAAGGTGCCCGGCACGCCGCACCCGTTCCGGCTCAAGGGGCCCGACGGCACGCGCATTGCGCTGTGTCCGGACGACGGCTGCGGCTTCATGAAATGGGAGGTGGCCATGCGCATTCCCGTCGTGCGCGAGCATGTCGAGGCCTGGCAGGCCGTGCGGGCAAAACGCGCCACGCCGGCGCAGCAGGAGCGCGTCGCCGGCCAGGAGCCGGGGGCCAACGCGATGCCGCCGCAGGCGCTGATGCATTATCCGCGCGACGAGGCCGTCCTGGCGGAGGCCCATGACGTGATGCAGCGCAGGCTGGACAGGCTGCGCGCCCAGGTCCAGGGCCCGGGCACCAATGTCCAGAACGCGCAGGCGCCTGCGCTCTCGCCCGATGCCGTGGACCTCCTGGCGCTGTACCAGATGACCATCGGCGGCGGCTACGAGGGGCGGCGGATCCGCGCGGTGCCATCGGCCGACGACAAGCTGTATCTGCCGACCATCCCGATGGACGGCTTCGCGCGCCCGGCGGGCGACCTGCTGGTCGGCAAGCCGCCTTACGACAAGGAGAACCTGCTGCCGATTGCCGCCGAGCGGGTCGGCACGGCCGCCAAAGGCGACGCCACGGCCCATTTCCTGGACCAGTGCTTCGCCATCCAGTACAGCTACACCGGGTTCGATGACGATTCCGGGCCGGCCGCGGACATGCTGCACAGCAAAGGCATGCTGATCATTCCGCCACCGGGGTACTGGTCGTCCGCGCACGACGGCATGGACCTCGCCTGCTCCAGGGAAGACCTCAAGGTGCTGTCGCGCTGGAAGCAGGGGCGCGACCGCGCCGGCCTGCCCGACACGATGCTCAGCACCGGCAGCCTGCGTGTCAAGGACATCCTGATGCCGGGCCGCCTCGGCGCACTGCCGATCCCCGAACTGCGCAAGCGCAACATGGACACGGACGGCGACGATGCGTTCGTCTATGCCGGCTATCCCAAGCTGGCCGCGCATATCCGGCAGGTCATGGAGGAGCGCGGCGGCCGGCGCAAGACTGAGTACGCCTTCAAGCCGCCGAAGACCGCGAGCCCGGCGTTCGACGAGCAGGGGCAATACCAGGCCGGGCGCGCCCGCGAGATCCTTGCGGTGCAGCGGGGCGGCCAGCTGGTCGGGGCGGCCAGCAATGCCGCCACGCGCTTCCTGTCGCAGCCGGACGCGCTGCGCGAGGCGATGGCCAGGGACATGATGTTCGGCACATACGATGGCGTCGACCGGCGCTTGCGCAACGGCCTGCGGGCCCGGATCGGCGGCAGCGCCGATGCGCCCGCGCTGGGCGAGCTGCTGGCGTTGGCGCACCAGGGGATCGGCCGCGCACACCTGCCGCTGGCGCGCGAGGTCGCGCTGCTGCTGCATACGCTGACGACGCAGCTGGGCGCGGCCGGCGCGCGGCCGGCGCCGCCGATCTCCGCGGAACTGACGCAACGATTCGGCGCGCTCGCCGAAGCCTGGACTGCGGCGCCGGACACGCACGCGCGCATCCACGCGATCCTCGACCATTACCCGGTGTGCCGCCTGTCGCACGAGCAGTTTCCCAACGGACAGCCCGGATACCTGGAAGGCGAGCCGGAGCTGACGATCCGCAACCTCTTCACCCTGGCAGTGAAGGTCGGCACCGATGCGCTGAAATCGGATACCGGGACCAACCTCTTCTCGACACTCATCGAGCAGTGCGCCGTCATCGAGCGGACGTACCACGACCGGGTGCGGCAGGTGCCGCACACCAAGCAGACCGCGCGCGAGTTCCGCGACGGCCGCTTCGATCCCGCGCGGGCGGCGGCTGCGCTGGAGCGCATGCCGACCCTCGCGGCGGGGGTCATGCAGGATGCCGTGGGTGCCCTTCAGCAGGCGGGCTTGCTGGCCTCGCCGCCCGCGCCGGCCGAGCGGGTGCGGACGGTATCGCCCAGCGACATCAAGCGGACGGCGGCGACGCTCAACGATCAGGCACACGCGGCCTCGGCGCGGATCACGTCGCTGCTGCAGGCCAACCTGCACGGGTGGGCCGGCCCCGGTGCGGGCGCGGTGCGCCTTGCCGGGCTCAAGCATGCCGTCAAATCGGCGGGGTCGCTGGAGGACAAGCTGGGCTACCTGATCGCCGGCAAGCAGCTGGATCTGCCGGAGGCCGTCTCGCAGGTGAACGATGCCCTGCGCTACAGCATCGTGCTGCCGTCGCCCACGTTCGTGCCGGCGTCTCGCCGCATTCTCGCGGGCCTCGAAGAGCACGGGCATGCGATGACCGAACGCACCAATCACTTCGCCCGCCGGGGCAGCGCGTTCCGGGCGCTGAGCGTGACCCTGCGGGATCCGAGCGACGGCCTCCTCTGGGAGGTCCAGTTCCATACGGAGCAGACCTTCGAGTTGAAAGAGCGCTACCACGACCTGTACAAGCAGGCGCAACGGGCGCGGCACCAGGGCGCGTCATTCGACGCACTGCGCACGCTGCTCCAGCCCGCGTGGAAAGACTTCAATGCGGTGCCCATGCCGGCCGGGTGCGATGAGATCGACGACTGGCAGCAGGAGCCGGCCCAGGCTGCGGTGCCGGGGCCCCAGCCCGGGCCCGACGGACAGGGCGCGCAGCGGACGATCGCGCCCTATCTGCTGCCGCTGGCCCGCCGGCTCGGCGCGCAGGCCCGCCGCATCGAAACGCTGGTCTCGCCAAAGGTGCAGACGGTGCTGCGGACGTGCGGCGGTAAACTGCGCGAAGACCAGCCGGGCGACTGGCGCAATTTCCTCTTCAAGAAGGAGCGCTCCATCGCACGCAAGATCGCGTTGCGCCAGCGTGCCGGGCAGCTGACCCCGGAGACCGCCGCGGCAGGTGTCCGGGATAGCCTGCGGTACGAAGTCGTGCTGCCCGCCGAAGGCTTCGGGAAGACGGTGACCGCGATCCTCAAGATGCTCGGCAAGCAGGGCCTGAGGACGATGCGCATGAAAAACGCGTTCGTGCAGCCGGACACGACTTACGCCGGCCTGAACGTCAACCTGCGCCTGGCCGTCGGCAATCTGCCCGGGGATTTCGAAATCCAGTTCCATACGGCCCAGAGCCTGAGCATCAAGCTCAGGGGGCACAAGGACTACGAGAAGCTGCGGGAATTGCCGTCCGCAAACACGCATGACGAGCACGACGAGGCGGGCGCCGATTTCGCGGCGGAGCGCGAGCGGCTCCTGAAAAAAATGCGCGACGCGGCGGCGCGCGTCGAGCGCCCGCAGGGAATCGAGACCCTGATTCCGTTCGATCACTATCGGGATGCGCAGCCGTCCGGCACCAGCCGGCGGACAGGCTGA
Protein sequence:
MRAASPGAPCPSRPWPTHRKAPQLPVWPAGTASHSHASPSGKRPLSHESAGRHPVSTNAKRAGTMKFDPNYRHRPPLHLVNAGRGHAPAPSKPQGHRAPRARALDLPRPARAPAGVAQQDRASPSAVEGALSKALNYPERDLDREAAMQLDIQREEQQYELWCKSGLGFPERCLDMARDNVLAERNGHGRALVFLMPDSDAEANIDLLGHYLAKLGDGGPGRVDPALRDGIRACAELCAGYLVHTSWFEGAPVATYAHLANKLSKFPDRAACMEGLAWIARQVLLARHLYRLGDRQATTLVGGLAKNTRSEACRDAILRLTGGLLGDNAMRGRLNAIQVPMLLNALSKWPTHDEAKSFVLQLADLMAPPSELLHALDGQGVANSLNALSKWPGEARAEKLALRLAKRLVADPDLLLSMREQEVTNSLNALSKWAHREEAKQAMLRLAARLADEPQLRRAVQPQGVANALNALSKLSEEPQAKQTVLLLADRIATEPRLLQALEAQGVANALNALSKWPGETRAFRAAHLLTERLAADPPLRRALKVQEFKCTLNALSKWPREDAMKHVALQLASRIPAEPGLLPALGAQDIANVLNALCKWPGAEGAKRTVLLLARRLEMEPQLRSALSALELANSLGALAKWPGEAQMGRTAMQLAERLMAEPKLRQALEAQGVANVLNALSWWSHQDTAKLVAMQLADRVAAEPELLKAMDHQQLANTLSALSRWPDEQRAGHAARALVAHLTAEPAGRWRDLDARHTSNALFALSKWSDENWATQVVLQLAERIATEPALLDDADAQGVSDALCALSKWPGEDSARLATRELAGRLLADTALQAAHDAQRLANTLNALAKWQREPEAMRAFWQLSTLPGRASHPWRAFNIVDMAQIGNAFARLVQDEGEDFERARTVLQRLAIHLELHPECFECSGSGHIGVLFKSFASLRMQRELRPLGTPALNRVMTLCRETQLRDEPLETVGNLCLGLLPLARSPELARHRVPALKVFESLQPVVARKIDSYLRHGVRASAGSALRVMDGQEACGTRGPALTFYQILKAYALVVRQWKPRYIQGDRQAVQARQATLKQWVDATLARTRGVIESDLQEMSWNLIAQIEAGDNVLNALDLRIGRELTAITQRHPPTRFDLAGARTRMRTEPGKVRPVKAGVGATRHVTVDLQGRELKVDGGAEQPYSFYARLTGQPLVEVQLPGALSTFMLARTFQYQGEPWRFDLFGGSRLTRGRMRQVKAILANNPPLASVLPAMRYADSAPGSAFMTLTHKLAPQREDWSRMQRALLEMVPPDHVVEGSLRVGWFEDVKVPGTPHPFRLKGPDGTRIALCPDDGCGFMKWEVAMRIPVVREHVEAWQAVRAKRATPAQQERVAGQEPGANAMPPQALMHYPRDEAVLAEAHDVMQRRLDRLRAQVQGPGTNVQNAQAPALSPDAVDLLALYQMTIGGGYEGRRIRAVPSADDKLYLPTIPMDGFARPAGDLLVGKPPYDKENLLPIAAERVGTAAKGDATAHFLDQCFAIQYSYTGFDDDSGPAADMLHSKGMLIIPPPGYWSSAHDGMDLACSREDLKVLSRWKQGRDRAGLPDTMLSTGSLRVKDILMPGRLGALPIPELRKRNMDTDGDDAFVYAGYPKLAAHIRQVMEERGGRRKTEYAFKPPKTASPAFDEQGQYQAGRAREILAVQRGGQLVGAASNAATRFLSQPDALREAMARDMMFGTYDGVDRRLRNGLRARIGGSADAPALGELLALAHQGIGRAHLPLAREVALLLHTLTTQLGAAGARPAPPISAELTQRFGALAEAWTAAPDTHARIHAILDHYPVCRLSHEQFPNGQPGYLEGEPELTIRNLFTLAVKVGTDALKSDTGTNLFSTLIEQCAVIERTYHDRVRQVPHTKQTAREFRDGRFDPARAAAALERMPTLAAGVMQDAVGALQQAGLLASPPAPAERVRTVSPSDIKRTAATLNDQAHAASARITSLLQANLHGWAGPGAGAVRLAGLKHAVKSAGSLEDKLGYLIAGKQLDLPEAVSQVNDALRYSIVLPSPTFVPASRRILAGLEEHGHAMTERTNHFARRGSAFRALSVTLRDPSDGLLWEVQFHTEQTFELKERYHDLYKQAQRARHQGASFDALRTLLQPAWKDFNAVPMPAGCDEIDDWQQEPAQAAVPGPQPGPDGQGAQRTIAPYLLPLARRLGAQARRIETLVSPKVQTVLRTCGGKLREDQPGDWRNFLFKKERSIARKIALRQRAGQLTPETAAAGVRDSLRYEVVLPAEGFGKTVTAILKMLGKQGLRTMRMKNAFVQPDTTYAGLNVNLRLAVGNLPGDFEIQFHTAQSLSIKLRGHKDYEKLRELPSANTHDEHDEAGADFAAERERLLKKMRDAAARVERPQGIETLIPFDHYRDAQPSGTSRRTG
Protein structure:
NONE
download
Loading ...
Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
264902 2417 9.41 -0.356 41.54
Plant infestation information
Experimental plant:
Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum Disease name: Bacterial wilt
Host classification: Eudicots NCBI Species: 4111, 4081, 4113
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.