Effector profile
| PlantPEAD ID: PlantPEAD00434 | Uniprot ID: Q8XRJ3 | Source: Database |
| Localization: Cytoplasmic(Pre) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: GMI1000 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: RSp0838 | NCBI Gene ID: AL646053 | |
| Entry name: Q8XRJ3_RALN1 | Protein name: Type III effector protein | |
| DOI: 10.1093/nar/gkab1037 | ||
Gene/Protein information
Gene sequence:
ATGATGTCTCTGTGGCGTTACCGCGCCACATCCCTGTGCAACTGTTGGATCATGCAGCCCGCCGCCCTGGCGGGTCTTTTTTTTCCCGCGCGCGAACGCCACACGGCCGCACAGCCGATCTTGCCGCCCCGCGCGGCGCAGACCGGTTGCCCCGGGAATCAGACGAATCCGTTCTGCTCTAGTTTTCTTGCGCTTGCCTTGAACAGAGATCGCGGAGAAATGTCGACGGAAGGCTGCCTAGCCAATAATCTGATCCGATCGCCCGGCGCAGAACCCGGGCCCGGACGAGCAGTCGCCCCTCACCTCCAAACGCACACCATGATTCCCAAACGGATCGGCGGGAACAGCCTACCCTCCCTGGCCGGCAACACACCGGCGGACCGCCACGGCGAACCGGCCGCCGCGCCGCTCGCGCCGACGGCGCGGACCGCCGGCCAGCAACTGGCCGAGCTGAACACGCCGCGCACCCCGCGCCAGCCGCCCGCGATGGACGTGCTGAAGCGGCGCCGCAAGCCTGAGACGCGGCAGCGGCTGCATCGCCTGCGCAAGGCCCTCGGTGAAATCAGCCCGGCACCGTCGTCGCCGGAGCAGGCCTGGGCCGACATTCGCAACGCCATGGCCCGCGCGGATCTCGCCGGCTGGACCCTCCCGGCGCTGTCGGACGAGGCCGCCATCCGCCACGCCGACGGCTCGGTGGAGATCGGCCTGATCTCCCACGCCATCGTGTTCAATCCGGGCGGCGCGTTCCGCATCCTGGATCTGCTATCGCCCGGCAGCCCCTACTTCGAAATGGCCGGGCATGGCGGGATTGCGTTTGTGGCGCCGCGCTGA
Protein sequence:
MMSLWRYRATSLCNCWIMQPAALAGLFFPARERHTAAQPILPPRAAQTGCPGNQTNPFCSSFLALALNRDRGEMSTEGCLANNLIRSPGAEPGPGRAVAPHLQTHTMIPKRIGGNSLPSLAGNTPADRHGEPAAAPLAPTARTAGQQLAELNTPRTPRQPPAMDVLKRRRKPETRQRLHRLRKALGEISPAPSSPEQAWADIRNAMARADLAGWTLPALSDEAAIRHADGSVEIGLISHAIVFNPGGAFRILDLLSPGSPYFEMAGHGGIAFVAPR
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 29550.9 | 276 | 10.24 | -0.289 | 53.97 |
Plant infestation information
| Experimental plant: | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG: rso:RSp0838
PRINTS: