Effector profile
PlantPEAD ID: PlantPEAD00442 Uniprot ID: Q8Y1T1 Source: Database
Localization: Cytoplasmic(Pre) Pathogen taxonomy ID: 305 Pathogen type: Bacteria
Species: Ralstonia solanacearum Strain: GMI1000 Other name: Ralstonia nicotianae, Pseudomonas solanacearum
Gene name: RSc0608 NCBI Gene ID: AL646052
Entry name: Q8Y1T1_RALN1 Protein name: Type III effector protein avra
DOI: 10.1093/nar/gkab1037
Gene/Protein information
Gene sequence:
ATGAGAAGAATCGGCAACTTTTTCAGAACGCGATCGCACGCGTCCGGATCATCCCGCGGCCGGACGCATGAGCGGGAAGAAGGTTCCTCCGGGCGAGCGGCCCGTTCTCCGAGTCCGGCGCTGTCGGACTTGCCCAGCTCACCTCGCAGCCGGCATGTCAGTACGGTCGCCTCGCCGACGCGGTTCGATGACGACGGGAGGGTGACATATCCGGGGCATATCCAGTACCAGACTTCGGAGTCCGAACGCGAGCGCTACCCCGACCTCGCTGAGGCGGTCGGTCATTCGCGGTATACCGGCCCCGGTTCGCCAAGGCCAGAGCGTTTCCCGATCAGCGGTTACTTTCCCGATGGCCAGTACTTCAGCGTGACAGGCCTCCGGGGGCCAGCCATCCGCTCGGGCGACGACGCGGTGATCGACCGCCAGCACGCCAGCCACGTGATCGACCATGGCGAAATGTCCGACGCGCAGGCCGGCCGGTTCATGGATTGGCAGAACCGGTCGATCTATCCCACCTACGAGACAAGCGGCTGGGAATACAGCAACTGCGTGCATGGTCACGCTGAGGTGGGCCGGAGTGTTTTCGGGTGGGATGTTTATCCCGACCAGCACGCCCGGCCGCAGGATCTGGCCGATCAGATGGGGAACCTGAGGGTCCGCAACTACAACAGCGATAGCGATAGCGACGGCTAG
Protein sequence:
MRRIGNFFRTRSHASGSSRGRTHEREEGSSGRAARSPSPALSDLPSSPRSRHVSTVASPTRFDDDGRVTYPGHIQYQTSESERERYPDLAEAVGHSRYTGPGSPRPERFPISGYFPDGQYFSVTGLRGPAIRSGDDAVIDRQHASHVIDHGEMSDAQAGRFMDWQNRSIYPTYETSGWEYSNCVHGHAEVGRSVFGWDVYPDQHARPQDLADQMGNLRVRNYNSDSDSDG
Protein structure:
AlphaFold
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
25692.7 230 6.25 -1.027 54.12
Plant infestation information
Experimental plant:
Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum Disease name: Bacterial wilt
Host classification: Eudicots NCBI Species: 4111, 4081, 4113
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.