Effector profile
| PlantPEAD ID: PlantPEAD00444 | Uniprot ID: S6SR81 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 317 | Pathogen type: Bacteria |
| Species: Pseudomonas syringae | Strain: pv. actinidiae biovar 3 strain ICMP 18884 | Other name: |
| Gene name: HopM1 | NCBI Gene ID: AOKG01002469 | |
| Entry name: S6SR81_PSESF | Protein name: Type III effector HopM1 | |
| DOI: 10.1111/mpp.12989 | ||
Gene/Protein information
Gene sequence:
AGCGTGCCAGTCAGCAGAGTGAAATAGTCCCGGTCGCCGCCCATCCAAATGCGGTCACTCCCAGCAGCAATCCGCCACTGATGCCCAACCAGGCACGTCATCACGCGGCAGAAAGCTCTGCTGCCGGCGCAGCGCGGCTGAAGGTCGCGGTGCAGCACGAAAAACTCTTGAAGGAATTCCAGGCCGAGCAGGCGACGGCACCCGGCAGCGGTGCGCCCATGATCAGCGCGCGTGCCGCTTTTTTGATCGGTAGCTCGCTGCAATCCCTGCCGAAGTCCGAAAAAGTGCCCTTTGAGGTCATGGCTGAACGGCTGTCTCCTGAGCGCTATCAACTGAAACAGTTTCACGGCTCGGAGCTGCAGCAACTGTTGGGCAAATTTGCCCAGCCGGGGCAGGCGCCTGACAAAGCCGAAGTCGGGCAATTTATCAAGGGTTTTGCACGGTCAGTTGCAGATCAGGTAGAGCATTTCCAGCTTATGCACGATGCAACGGCCCATTCATTTGGCGCTGGTGGACTGCGTGACCGAACGACTCTGGCTGTCAGTCAGAAAGCGCTTGGTGAGTATGCGGACCGCGCCAGCAAAGCGATTGAGGACGGGCTGAATGAAAGTATTACGTCACTGGACGGGCACATAGCAGATCTGGACGCTGCGCTGGGAAACGTCGAGGAGGGCGATAACCTCGTTCTTGAGATGGACAAACAAGCGCTGGTCAACGCCAAGGCGACTCTGGTCGATCTGCACGCAGAGTTCCCCAAGTCACCGGAAGCCAAGCGCCTGAATTCGGTGGCTGCTCATGCGCAGATGGATACTCTGGTCGAAAAACTGAACGTGGATCGCAATTCTGTCGGCGGCTGGAAGGGTGTCGGGCCGATTGTGGCGGCGGCTGTTCCGCAATTCATTTCGTCCATGACCCACCTGGGCTTCGTCCGTACGGCCACCAGTGATGAGATGAAAAGCGCGGTACCCGGAAAAAGTAGCGACGCGAGCATGTTGAAGGCCGCAGTCGTGGGACTGGTTGCGGGGGTTGCCCACGAAGGGGTCACCAATCTGGTTAAGCCGTTGATTCAGGCCGGGTTGCAGAAGACCGGCCTCAATGAGCGCATGAACATGGTTCCGCTCAAGGGGATTGACACTAATTCTGTGATTCCGGATCCCTTTGAATTCAAGAATGAGGACGGTGCGCTCGTCAAGAAAACCGCTCAGGAAATGACCGAAGACAAAGCCTTCGTGGCGGGCGAACGAGCCGTTCTGAACCAGAAAAAAGTTCAGGTCTCGTCCACCCATCCACTGGGTGAAATGATCCCTTACGGCGCCTTTGGCGGTGGGCAGGCTGTTCGCCAGATGCTTCATGATTTCAATCAGATCAGCGGCCAGACGTTGACTGCAAAGGCGCTGACATCCGGGATGGCGGGTGCTATTTCGGCTACCACACAGACCATTGCACAGTTGAAGTCCAACTACGTGGATCCACAGGGGCGCAAGATCCCAGTTTTCACGCCTGAGAGGAAAAATGCAGACCTGGGCAAGGATCTGGCCAAAGGGCTTGACCTGCGCGAGGCGACGGTGCGCACCGCGTTTTACAGCAAAGCCATATCGGGCATTCAAAGCTCTGCCGTGAACGCCCTGGTGCCACCTTTGGCAACCATGCCCAAAGGTGAGCCCGGCAGGCTCAGTGCGGGGAACATCCTGCGCAACATGGCGCTGGCTGCGACGGGCTCGGTGTCTTATCTGTCCACCCTTTACGCCAACCAGTCGATAACGGCTGAAGCCAAAGCGTTGAAGGACGCTGGCATGGGAGGTACGACACCGATGCTGGCCCGTACTGAGACCGCGTTGAACAATATCCGCCATCCGGATAGGGCATCTCTGCCACATACGTTCCAACCGGGTACGTTGGGTGGCGTGCCAAGAGCAGTGGAAAGCGCTTATCACATGGGCAGGGGGGCTTTGCAATTACCGACCCAAATGGCCGTGGATACCGTAAGAGTCGTGGAGGAGGGGGTGTTGAACGCTCCATCTGCCGTGCGTAACGCGTTTAAATCAGAGAAACCTGCCGTCGAGGGTGACGAACTGGTTGCCATGGAGGAGGGCCGCAGACGCTAA
Protein sequence:
RASQQSEIVPVAAHPNAVTPSSNPPLMPNQARHHAAESSAAGAARLKVAVQHEKLLKEFQAEQATAPGSGAPMISARAAFLIGSSLQSLPKSEKVPFEVMAERLSPERYQLKQFHGSELQQLLGKFAQPGQAPDKAEVGQFIKGFARSVADQVEHFQLMHDATAHSFGAGGLRDRTTLAVSQKALGEYADRASKAIEDGLNESITSLDGHIADLDAALGNVEEGDNLVLEMDKQALVNAKATLVDLHAEFPKSPEAKRLNSVAAHAQMDTLVEKLNVDRNSVGGWKGVGPIVAAAVPQFISSMTHLGFVRTATSDEMKSAVPGKSSDASMLKAAVVGLVAGVAHEGVTNLVKPLIQAGLQKTGLNERMNMVPLKGIDTNSVIPDPFEFKNEDGALVKKTAQEMTEDKAFVAGERAVLNQKKVQVSSTHPLGEMIPYGAFGGGQAVRQMLHDFNQISGQTLTAKALTSGMAGAISATTQTIAQLKSNYVDPQGRKIPVFTPERKNADLGKDLAKGLDLREATVRTAFYSKAISGIQSSAVNALVPPLATMPKGEPGRLSAGNILRNMALAATGSVSYLSTLYANQSITAEAKALKDAGMGGTTPMLARTETALNNIRHPDRASLPHTFQPGTLGGVPRAVESAYHMGRGALQLPTQMAVDTVRVVEEGVLNAPSAVRNAFKSEKPAVEGDELVAMEEGRRR
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 74078.2 | 700 | 7.97 | -0.229 | 33.29 |
Plant infestation information
| Experimental plant: Actinidia (related: kiwifruit) | |
| Susceptible plant: Actinidia chinensis | Disease name: Kiwifruit bacterial canker |
| Host classification: Eudicots | NCBI Species: 3625 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: