Effector profile
| PlantPEAD ID: PlantPEAD00450 | Uniprot ID: A0A0K6FTM3 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 456999 | Pathogen type: Fungi |
| Species: Rhizoctonia solani | Strain: BBA 69670 | Other name: Thanatephorus cucumeris, Rice sheath blight fungus |
| Gene name: RsRplA | NCBI Gene ID: CYGV01000791 | |
| Entry name: A0A0K6FTM3_9AGAM | Protein name: RlpA-like protein double-psi beta-barrel domain-containing protein | |
| DOI: 10.3390/ijms21218070 | ||
Gene/Protein information
Gene sequence:
ATGTTCTCTACTGCTGTTGCTGCTTTTGTCCTCGCGGCCGCGGTCAACCAGGCTGCTGCTGAGCCCTCTCGCGCTCGTCACTTGTACGCCGCTCGTGCCTACGCGCAAGACTCGCACCTGCTCGAGGATTACGATACGTAGGTTTTTTCTCCGATGCACCTGTGACTGGATTTGACGATCGATACCTCCAGTTACCACGCCCGTTACATTGCGATTGGTGAGTTGAAGGCTATTCGCGACTTGGTACTTCTTGCTGATATCTTTATTCAGGTTGCAAGGATGCTAAGAAAAATGACACCGATTTCTGGAACAATTGCTGCCACCCGCTTGCCAAAGACGCAGATTCGTCGGTCCCCGCCCAGTGCAAGGCCTCTAGCAAGTCGTACTCTGGCTCTGGCAACTCTTCGCCTTCCTCTTCCTCTTCGTCTGCTGCGTACACTCCCGCACCAACTCAAGGCTCTGGATCCGGAGAGACTTACACTGGTGGACAGTGAGTGTCAACTATATAGATAACACGTTCATGGATCTGATGAATTCCAGCGGAACCTACTTTTATCAAAACGGAGTAGCCGGTGCCTGCGGTACCGTGCATTCGGACAGCGACTACATCGTGGCCGTTGATTACCGCCGATATGGTGATCTTGGCAAGCAGTCCGATCTCTGCGGCAAGAAGGTACTTGTCACCAACACCAACAACGGCAAGACTGTCACTTGCACTGTTGCCGACGCGTGCCCTACATGCGATAACAGCAGCTCTTTGGATTTGTCCGAGGGTGCTTTCAAGGCTCTTGCTCCCTTGAGCGATGGTTTGATTCCCATTAGCTATCAAGTCATCGGTTGA
Protein sequence:
MFSTAVAAFVLAAAVNQAAAEPSRARHLYAARAYAQDSHLLEDYDTYHARYIAIGCKDAKKNDTDFWNNCCHPLAKDADSSVPAQCKASSKSYSGSGNSSPSSSSSSAAYTPAPTQGSGSGETYTGGHGTYFYQNGVAGACGTVHSDSDYIVAVDYRRYGDLGKQSDLCGKKVLVTNTNNGKTVTCTVADACPTCDNSSSLDLSEGAFKALAPLSDGLIPISYQVIG
Loading ...
Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23678 | 227 | 5.8 | -0.308 | 37.45 |
Plant infestation information
| Experimental plant: Nicotiana benthamiana (no common name found) | |
| Susceptible plant: Oryza sativa | Disease name: Rice sheath blight |
| Host classification: Monocots | NCBI Species: 4530 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR009009,IPR036908
Pfam: PF03330
SMART:
KEGG:
PRINTS: