Effector profile
| PlantPEAD ID: PlantPEAD00453 | Uniprot ID: A3RQ96 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: strain UW551 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: RipS1 | NCBI Gene ID: AAKL01000005 | |
| Entry name: A3RQ96_RALSU | Protein name: Shikimate kinase | |
| DOI: 10.3389/fpls.2021.705717 | ||
Gene/Protein information
Gene sequence:
ATGAAATTCGATACGACCTACCACCACCGGCCGCCTGTCCATTTTGTCAATGCGGGAAGGGGCGATGCTCCGGCTCCGTCCAAATCGCAAGGGCATCGCGGGCCGCGGACCCGGTCGAGCGACCTGCCTCGCCCCGCGAATGCGCCGACGGGCGCGGCACAGCGGGATCGGACGTCGCCGTCGGCTGCTGACAGGGCACTGTCGAGAGCGCTGAACTACCCTGAGCGCAGCCTCGACCGTGAGGCGGCCGTGACGCTCGGCCTCCAGCGCGATGAACAGCAGTACGAACTCTGGCGCATGAGCGGCATCGGGTTTCCCCAGCGCTGCCTCGACATGGCCCGCGACAACATCCTGGCCGAACGCAATGGGCACGGCCGTGCGCTGGTCTTCCTGATACCGGACGGCGACGCCGAAGCGAACGCCGGTCTGCTGGGGCACTATCTTGCGAAACTGGGCGACGTCGGACATCGGCGGATCGATCCGGCGTTGCGCGACGGGATTCGCGCCTGCGCCGAGCTGTGCGCGGGGTACCTTGTGCACACGTCCTGGTTCGAAGGTGCACCCATTGCCACGTACTCGCACCTGGCGAACAAGCTGAGCAAGTTTCCGGATCGCACCGCGTGCACGGAGGCGCTGGCGTGGATTGCCCGGCAGGTCCTGCTCGCACGGCACCTGCATCGGCTGGGTGAGCGGCAGGCCGCGATGCTCGCGGGCGGACTGTCGAAGAACACGCGAAGCGACGCCTGCAGAGATGCCATCCTGCGCATCACCGGCTGGCTGCTCGACGATGCCGCGACGCGTGGGCGCCTGAATGCCTTCCAGGTCCCCATGCTGTTGAACGCGCTGAGCAAGTGGTCGGCCCACGATGAGGCGAAGTCCTTCGCGTTGCAGCTGGCCGATCTCATGGCGCCGCCATCGCAGCTGCTCTATGCGTTGGACGGGCAAGGCGTCGCCAACAGCCTCAATGCACTGAGCAAGTGGTCGGGCGAAGCGCGGGCGGAAAAGCCGGTGCTGCGGATGGCCAAACGGCTGGTGGCGGAGCCCGATCTGCTGCTGTCGATGCGGGAGCAGGAGGTGACCAACTCGCTGAATGCATTGAGCAAATGGGCACACCACGAAGAGGCCAAGCAGGCGATGCTGCTGCTGGCCGCGCGCCTGGCGGATGAGCCGCAGCTGCGCCGGGTGGTCCAGACGCAGGGGGTGGCCAACGCGCTGAATGCGCTGAGCAAGTTGTCGGAGGAACCGCAGGCGAAACAGACCGTCCTGCTGCTGGCGGACCGCATCGCCACCGAGCCCCGGCTACTGCAAGCGCTGGAGGCGCAGGGCGTCGCCAACGCGCTGAGCGCACTGAGCAAGTGGCCCGGCGAAGCGCGGGCGCTGCGCGCCGCCCATCTGCTGACGGACCGTCTGGCCACCGACCCGTCTCTGCGACGGGCACTGAAATCGCAAGAATTCAGCGACACGCTGAATGCCCTGAGCAAATGGCCGCGCGAAGACGCGATGCAACACGTCGCGCTGCAGCTCGCCTCGCGCATTCCGGCGGAGCCCGAACTGCTGCCGGCCATGGGGGCGTCGGAGATTGCCAATGCGCTGAACGCGCTGTGCAAGTGGCCGGGCGCCGAGGGCGCGAAGCGGGCGGCGCTGCTGCTGGCCGGACGCCTGGAGACGGAGCCTCAGTTGTGTAGTCAGTTGGGTGCCCTGGAGCTCGCCAATAGTCTGGGCGCACTGGCCAAATGGCCCGACGAAGCGCAGATGGGCCGGACAGCGGTGCAACTGGCCGCGTGTCTCATGGCGCAGCCCAAGCTGCGGCAATCGCTGGAGGCGCAAGGCGTCGCCAACGTGCTGAATGCACTGAGCAAGTGGCCCCAGCAGGACGCCGCGAAGCGGGTCGCCATGCAACTGGCGGGTCGCGTGGCGGCCGAGCCCGGGCTGCTCAAGGCCATGGATCATCAACAACTCGTCAATACGCTGAGCGCGCTGAGCAGATGGCCTGACGAACAGTGGGCCAGGCACGCCGCACGCGCGCTGGTAGCGCACCTGATGGCGGAGCCCGACGGCCGATGGCGAGCCCTGGATGCGCGGCGCTCCTCCAATGCGCTGTTTGCCCTGAGCAAATGGCCCGATGAGCACTGGGCAATACAGCTCGCGCTGCAACTGGCTGAGCGCATCGCCACCGAACCGACGTTGCTGGACAACGTGGATGCACAAGGCGTGAGCGACGCCCTGAGCGCGCTCTCCAAATGGCCGGGCGAAGACAGCGCGAGGCTGGCGACCCGCGAACTCGCCTGCCGGCTGATCGCGGATACCGCATTGCAGGCGGCGCACAGCACGCAACACCTGGCGAGCACACTGAATGCGCTGGCGAAGTGGCAACGCGAGCCGGAAGCCATGCGGGCTTTCTGGCAATTGTCCACGCTGCTGGGGCGGGTCAGCCACCCATGGCGCAAGTTCAATATCGCGGACATGGCCCAGATCGGCAACGCGTTCGCGCGCCTGGTCCAGGATGAAGGCGAGGAGTTCGAGCGGGCCCGGAGCGTCCTGCAGCGGCTGAGCATCCATCTCGAGCTGCATCCCGAATGCTTCGAATGCTCGAACGCCGGCCATATCGGGGTGCTGTTCAAGGCGTTTGCCAGCCTGAGGATGCTGCGGGAACTGCGCCCACTGGGCACACCGGCACTGACTCGGGTCATGGCGTTGTGTCGCGAGACGCAGTTGCGCGACCAACCGCTCGAGACCGTCGGCAACCTGTGTCTCGGGCTGCTGCCGCTTGCCCGCAGCCCTGAACTCGCCAGGCATCGCGTGCCGGCGCTGAAGGCCTTCGAATCCATGCAGCCGATCATGGCGCGCAAGATCGACAGCTATCTGCGGCAGGGCGTGCAGGCGACGGCCGGATCGGCCCTGCGCGCGATGGACGGGCAGGAAGCCTGCGGCACGCGCGGCCCTGCCCTGACCTTCTACCAGATCCTCAAGGCGTACGCGCTCGTCGTCCGGCAATGGAAGCCCCGCTATATCCAGGGCGACCGCCGGGCGGTGCAGGATCGGCAAGCCGCCCTCAAGCAATGGGTCGACGGCACGCTGGCGCGCACGCGGGGCGTGATCGAGGCCGACCTGCAGGAGATGAGCTGGAACCTCATCGCCCAGATCGAGGCGGGCGACAACATACTGAACGCGCTGGACCTGCGCATCGGCAAGGAGCTGACGGCCATCACGCAGCGTCACCCGCCGACCCGCTTCGACCTGGCCGGCACGCACGCGCGCATGCGCACCGAGCCGGGGAAAGTCCGTCCCGTGAAGGCGGGCGTCGGCGACACCCGCCATGTCACGGTCGACCTGCAGGGGCGCGAGCTCAGGGTGGACGACGGCGCAGAGCAACCCTACTCGTTCTATGCCCGCCTGACCGGCCAGCCGCTGGTTGAAGTCCAGCTGCCGGGGGCGCTGAGCACCTTCATGCTGGCGCGCACCTTCCAGTACCAGGGCGAGCCCTGGCGTTTCGATCTGTTCGGCGGCAGCCGGCTGACACGCGGGCACATACGGCAGGTCAAGTCCATCCTGGCGAACAACCCGCCGGTTGCCTCCGTGCTGCCGGCCATGCGGTATGCCGACAGCGCCCCCGGCAGCGCGTTCATGGCGCTGACGCACAAGCTGGCCCCGCAGCGCGAGGACTGGTCGCGGATGCAACGGGCGCTGCTGGAGATGGTGCCCCGCGATCATGTGGTCGAGGGCTCGTTGCGGGTGGGCTGGTTCGCGGATGTGAAGGTGCCCGGCACGCCGCACCCGTTCCGGCTCAAGGGGCCCGACGGCACGCGCATCGCACTGTGTCCCGACGACGGCTGTGGCTTCATGAAATGGGACGTGGCCATGCAGATTCCCGCCGTGCGCGAGCACATCGAGGCCTGGCAGGCCGTGCGGGCGAAACGCGCTACGCCGGCGCAGCAGGAGCTCGTCGCCGAACACGAGCAGGGGGCCAACGCGATGCCGCCGCAGGCGCTGATGCACTACCCGCGCGACGAGGCCGTCCTGGCGGAGGCGCATGAAGCGATTCAGCACAGGCTGGACAAGCTGCGCGCCCAGGTCCAGGGCCCTGTCGCCAATGCCCCGAACGCGCAGGCACCTGCGCTCTCGCCCGATGCGGTGGACCTCCTGGCGCTGTACCAGATGACCATCGGCGGCGGCTACGAGGGGCGGCGGGTCCGCGCGGTGCCGTCGGCCGACGACAAGCTGTATCTGCCGACCATCCCGATGGACGGCTTCGCGCGCCCGGCGGGCGACCTGCTGGTCGGCAAGCCGCCGTACGACAAGGAGAACCTGCTGCCGATTGCCGCCGAGCGGGTCGGCACGACCGCCAAAGGGGACGCCACGGCCCATTTCCTGGACCAGTGCTTTGCCATCCAGTACAGCTACACCGGGTTCGATGACGATTCCGGGCAGGCCGCGGACATGCTGCACAGCAAAGGCATGCTGATCATTCCGCCGCCGGGGTACTGGTCGTCCGCGCACGATGGCATGGATCTCGCCTGCTCCAGGGAAGACCTCAAGGTGCTGTCGCGCTGGACGCAGGGCCGCGACCGCGCCGGCCTGCCGGACGCGATGCTCAGCACCGGCAGCCTGCGCGTCAAGGACATCCTGATGCCGGGCCGCCTCGGCGCACTGCCGATCCCCGAACTGCGCAAGCGCAACATGGATACGGATGGCGACGATGCGTTCGTCTATGCCGGCTATCCCAAGCTGGCCGCGCATATCCGGCAAGTCATGGAGGACCGCAGCGGCCGGCGCACAACCGAGTACGCCTTCAAGCCGCCGAAGACCGCGAGCCCGGCGTTCGACGAACAGGGGCAATACCAGGCCGGGCGCGCCCGCGAGATTCTTGCGGTGCAGCGGGGCGGCCAGCTGGTCGGGTCGGCCAGCAATGCCGTCACGCGTTTCCTGTCGCAGCCGGACGAGCTGCGCGAAGCGATGGCCAGAGACATGATGTTCGGCACGTACGACGGTGTCGACCGGCGCTTGCGCAACGGCCTGCGGGCCCGGATCGGCGGCCGCGCCGATGCGCCCGCGCTGCGGGATCTGCTGGTGCTGGCGCACGAGGGGATCGGCCGCGCGCATATGCCGCTGGCGCGTGAGGTCGCGCTGCTGCTGCATACGCTGACGACGCAGCTGGGCGCGGCCGGTGCGCGGCCGGCGCCGCCGGTCTCCGCGGAACTGACGCAACGGTTCGGCACGCTCGCCGAGGCCTGGGAGGCGGCGACGGACACGCCGGCCCGCATCCACGCGATCCTGGACCACTACCCGGTATGCCGCCTGTCGCACGAGCAGTTTCCCAAAGGACAGCCCGGATACCTGGAAGGCGAGCCGGAGCTGACGATCCGCAACCTCTTCACCCTGGCGGTGAAGGTCGGCACCGATGCGCTGAAATCCGATACCGGAACCGATCTCTTCTCGGCACTCATCGAGCAGTGCGGCATCGCCGAACGGAGGTACCCCGACCGGGTGCGGCGCGTGCCGCATACCAAGCAGACCGCGCGCGAGTTCCGCGACGGCCGCTTCGATCCCAAGCGGGCCGCGGCCGCGCTGGAGCGCATTCCCACCCTCGCGGCCGGGGTCATGGAGGATGCCGTGGGCGCCCTTCAGCAGGCGGGCCTGCTGGCCTCGCCGCTTGCGCCGGCCGAGCGGGCGCGCGCCGCATCGCCCGGCGATATCAAGCGGACGGCGGCGACGCTCAACGAACAGGCGCACGCGGCCTCGGCGCGGATCACGCCGCTGTTGCAGGCCAACCTGCGCGCGTGGGCCGGCTCCGGCCTCGACCTTGGCGCGGGCGCGGTGCGTCTTGCCGGGCTCGAGCAAGCCGTCAAATCGACGGGATCGCTGGAGGAAAAATTGGGCGGTCTGCTCGCCGGAAAACAGCTGGATCTGCCGGAAGCCGTCTCGCAGGTGAACGATGCCCTGCGCTACAGCATCGTGCTGCCGCCGCCCGCGTTCGCGTCGGCGAGCCGCCGGATCGTCGCGGGCCTCGAAGAGCACGGGCATGTGATGACCGAACGCACCAATCACTTCAACCGTCTGGGCGGCGCGTTCCGGGCGTTGAGCGTGACCTTGCAGGATCCGAGCGACGGCCTGCTCTGGGAGGTCCAGTTCCATACGGAGCAGACCTTCAAGCTGAAAGCGCGCCACCACAACCTGTACAAGCAGGCGCAACGGGCGCGGTACCAGGGCGCGTCATCCGACGCACTGCGCACGCTGCTCCAGCCCGCGTGGAAAGACTTCAACGCGGTGCCCACGCCGGCCGGGTGCGACGAGATCGAAGACTGGCAGCAGGAGCCGGCCCAGGCGGCGCCGGGGCTCCAGCCCGGGCTCGACGGACAGGGCGCGCAGCGGACGATCGCGGCCTATCTGCTGCCGCTGGCCCGCCGGCTCGGCGCGCAGGCCCGCCGCATCGAAGCGCTGGTCTCGCCCAAGGTGCAGACGGCGCTGCGGACGTGCGGCGGGCAACTGCGCGAAGATCAGTCGGGCGACTGGCGCAATGTCATCTTCAAGAAGGAACGGTCCATTGCACGCAAGATCGCGTTGCGCCAGCGTGCCGAGCAGCTGGCCCCGGAGACCGCCGCCGCGCGTGTCCGGGATAGCCTGCGGTACGAAGTCGTCCTGCCCGCCGAAGGCTTCGGGACGACGGTGCACGCGATCCTCAAGATGCTCGGCAAGCAGGGCCTGAAGGTGATGCGTATGAAAAACCCGTTCGCGCAGCCGGACACGACCTACGCCGGCGTGAACGTCAACCTGCGTCTGGCCGGCGGCAATCTGCCCGGGGATTTCGAAATCCAGTTCCATACGGCCAAGAGCCTGAGCACCAAGCTCAGGGGGCACAAGGACTACGAGAAGCTGCGGGAATTGCCGTTCGCGAGCACACATGACGGGCAGGACGAGGCGAGCGCCGATTTCGCGGCGGAACGCGAGCGGCTCCTGAAAAAAATGCGCGACGCGGCTGCGCTCGTCGAGCGCCCGCAGGGCATCGAGACCCTGATCCCGTTCGATCACTATCGGGATGCGCCGCCATCCGGCACAAGCCGGCGGACAAGCTGA
Protein sequence:
MKFDTTYHHRPPVHFVNAGRGDAPAPSKSQGHRGPRTRSSDLPRPANAPTGAAQRDRTSPSAADRALSRALNYPERSLDREAAVTLGLQRDEQQYELWRMSGIGFPQRCLDMARDNILAERNGHGRALVFLIPDGDAEANAGLLGHYLAKLGDVGHRRIDPALRDGIRACAELCAGYLVHTSWFEGAPIATYSHLANKLSKFPDRTACTEALAWIARQVLLARHLHRLGERQAAMLAGGLSKNTRSDACRDAILRITGWLLDDAATRGRLNAFQVPMLLNALSKWSAHDEAKSFALQLADLMAPPSQLLYALDGQGVANSLNALSKWSGEARAEKPVLRMAKRLVAEPDLLLSMREQEVTNSLNALSKWAHHEEAKQAMLLLAARLADEPQLRRVVQTQGVANALNALSKLSEEPQAKQTVLLLADRIATEPRLLQALEAQGVANALSALSKWPGEARALRAAHLLTDRLATDPSLRRALKSQEFSDTLNALSKWPREDAMQHVALQLASRIPAEPELLPAMGASEIANALNALCKWPGAEGAKRAALLLAGRLETEPQLCSQLGALELANSLGALAKWPDEAQMGRTAVQLAACLMAQPKLRQSLEAQGVANVLNALSKWPQQDAAKRVAMQLAGRVAAEPGLLKAMDHQQLVNTLSALSRWPDEQWARHAARALVAHLMAEPDGRWRALDARRSSNALFALSKWPDEHWAIQLALQLAERIATEPTLLDNVDAQGVSDALSALSKWPGEDSARLATRELACRLIADTALQAAHSTQHLASTLNALAKWQREPEAMRAFWQLSTLLGRVSHPWRKFNIADMAQIGNAFARLVQDEGEEFERARSVLQRLSIHLELHPECFECSNAGHIGVLFKAFASLRMLRELRPLGTPALTRVMALCRETQLRDQPLETVGNLCLGLLPLARSPELARHRVPALKAFESMQPIMARKIDSYLRQGVQATAGSALRAMDGQEACGTRGPALTFYQILKAYALVVRQWKPRYIQGDRRAVQDRQAALKQWVDGTLARTRGVIEADLQEMSWNLIAQIEAGDNILNALDLRIGKELTAITQRHPPTRFDLAGTHARMRTEPGKVRPVKAGVGDTRHVTVDLQGRELRVDDGAEQPYSFYARLTGQPLVEVQLPGALSTFMLARTFQYQGEPWRFDLFGGSRLTRGHIRQVKSILANNPPVASVLPAMRYADSAPGSAFMALTHKLAPQREDWSRMQRALLEMVPRDHVVEGSLRVGWFADVKVPGTPHPFRLKGPDGTRIALCPDDGCGFMKWDVAMQIPAVREHIEAWQAVRAKRATPAQQELVAEHEQGANAMPPQALMHYPRDEAVLAEAHEAIQHRLDKLRAQVQGPVANAPNAQAPALSPDAVDLLALYQMTIGGGYEGRRVRAVPSADDKLYLPTIPMDGFARPAGDLLVGKPPYDKENLLPIAAERVGTTAKGDATAHFLDQCFAIQYSYTGFDDDSGQAADMLHSKGMLIIPPPGYWSSAHDGMDLACSREDLKVLSRWTQGRDRAGLPDAMLSTGSLRVKDILMPGRLGALPIPELRKRNMDTDGDDAFVYAGYPKLAAHIRQVMEDRSGRRTTEYAFKPPKTASPAFDEQGQYQAGRAREILAVQRGGQLVGSASNAVTRFLSQPDELREAMARDMMFGTYDGVDRRLRNGLRARIGGRADAPALRDLLVLAHEGIGRAHMPLAREVALLLHTLTTQLGAAGARPAPPVSAELTQRFGTLAEAWEAATDTPARIHAILDHYPVCRLSHEQFPKGQPGYLEGEPELTIRNLFTLAVKVGTDALKSDTGTDLFSALIEQCGIAERRYPDRVRRVPHTKQTAREFRDGRFDPKRAAAALERIPTLAAGVMEDAVGALQQAGLLASPLAPAERARAASPGDIKRTAATLNEQAHAASARITPLLQANLRAWAGSGLDLGAGAVRLAGLEQAVKSTGSLEEKLGGLLAGKQLDLPEAVSQVNDALRYSIVLPPPAFASASRRIVAGLEEHGHVMTERTNHFNRLGGAFRALSVTLQDPSDGLLWEVQFHTEQTFKLKARHHNLYKQAQRARYQGASSDALRTLLQPAWKDFNAVPTPAGCDEIEDWQQEPAQAAPGLQPGLDGQGAQRTIAAYLLPLARRLGAQARRIEALVSPKVQTALRTCGGQLREDQSGDWRNVIFKKERSIARKIALRQRAEQLAPETAAARVRDSLRYEVVLPAEGFGTTVHAILKMLGKQGLKVMRMKNPFAQPDTTYAGVNVNLRLAGGNLPGDFEIQFHTAKSLSTKLRGHKDYEKLRELPFASTHDGQDEASADFAAERERLLKKMRDAAALVERPQGIETLIPFDHYRDAPPSGTSRRTS
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 258202 | 2356 | 9.19 | -0.33 | 44.26 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR016024
Pfam:
SMART:
KEGG:
PRINTS: