Effector profile
| PlantPEAD ID: PlantPEAD00473 | Uniprot ID: D6BK26 | Source: Article |
| Localization: Apoplastic(Exp) | Pathogen taxonomy ID: 305 | Pathogen type: Bacteria |
| Species: Ralstonia solanacearum | Strain: GMI1000 | Other name: Ralstonia nicotianae, Pseudomonas solanacearum |
| Gene name: Rsa1 | NCBI Gene ID: EU707808 | |
| Entry name: D6BK26_RALSL | Protein name: Aspartic protease | |
| DOI: 10.1111/J.1364-3703.2010.00679.X | ||
Gene/Protein information
Gene sequence:
ATGAAAATCACCAAGATTACCGGAAAGAAATCGTTTCTCTTTGCCGTCGCAACGGCTGGAATGCTGATTGCCGGTTACGCCAGCGCCCAGCAGTCGGTCGAGCTGACCGGCAAGAACCTGACTGCCAACTGCGTGCGGTTTTATGTAAACGGCAACCAGGATGTCAAGCCCGGCGATACACGTTTGCTGGGCACCGTGAAAAGTAAACAGACATTCATGGGCTCCATTTTCAAGAGCCGCACTTGCGGTGGTGCGGCAATCCAGAACTTCTGGTACACGACAAATACGGCAGCTAAGCAAACGTGGAATCCTCCGTATGCGGCCAAGAACTGA
Protein sequence:
MKITKITGKKSFLFAVATAGMLIAGYASAQQSVELTGKNLTANCVRFYVNGNQDVKPGDTRLLGTVKSKQTFMGSIFKSRTCGGAAIQNFWYTTNTAAKQTWNPPYAAKN
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 11907.7 | 110 | 10.07 | -0.22 | 15.28 |
Plant infestation information
| Experimental plant: Capsicum annuum (related: pepper), Solanum tuberosum (related: potato) | |
| Susceptible plant: Solanum melongena, Solanum lycopersicum, Solanum tuberosum | Disease name: Bacterial wilt |
| Host classification: Eudicots | NCBI Species: 4111, 4081, 4113 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: