Effector profile
PlantPEAD ID: PlantPEAD00474 Uniprot ID: G4ZLE6 Source: Article
Localization: Cytoplasmic(Exp) Pathogen taxonomy ID: 67593 Pathogen type: Oomycota
Species: Phytophthora sojae Strain: strain P6497 Other name: Phytophthora megasperma f. sp. glycines
Gene name: Avr1d NCBI Gene ID: KC004057
Entry name: AVH6_PHYSP Protein name: RxLR effector protein Avh6
DOI: 10.1094/MPMI-08-21-0201-R
Gene/Protein information
Gene sequence:
ATGCGTCTCTCCAGCACCACCTTTGTTGTTCTTGCGGCCGTCCTCCTCGCAAGCGGCACTGCAGTATCGAAGGCCGACGAGACTGGCGTGACGAACGTAAACGCCGTTCACTCGCCGAATGTTCTCGCTGGCGTGGACAAGCGATTTCTCCGAAGCCACCACACGGAGGATGGCGAAGCCAAACTCTCCAACTACGACAATGAAGAGCGGAACGGCTTGTTCGGCGCGAACACTCTGTCAAATATGGGCAAGGATACGATTCTCCGCTTCCAGATGTTCACGAAATGGAAGGCCAATGGATACCTCCCGAAAAAAATCAAAGACGACATCCCCAGGAGTCTCTACAAGGCGTACAAAATCCACTACCGCATGAATTAG
Protein sequence:
MRLSSTTFVVLAAVLLASGTAVSKADETGVTNVNAVHSPNVLAGVDKRFLRSHHTEDGEAKLSNYDNEERNGLFGANTLSNMGKDTILRFQMFTKWKANGYLPKKIKDDIPRSLYKAYKIHYRMN
Protein structure:
PDB(X-ray)(7C96)
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Main properties of effector
Molecular weight Sequence length Theoretical pI GRAVY Instability index
13979 125 9.65 -0.43 26
Plant infestation information
Experimental plant:
Susceptible plant: Glycine max Disease name: Root and stem rot of soybean
Host classification: Eudicots NCBI Species: 3847
Pathogen-plant protein interaction
Uniprot ID Protein name Gene name Species Protein sequence
No Record found.