Effector profile
PlantPEAD ID: PlantPEAD00474 | Uniprot ID: G4ZLE6 | Source: Article |
Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 67593 | Pathogen type: Oomycota |
Species: Phytophthora sojae | Strain: strain P6497 | Other name: Phytophthora megasperma f. sp. glycines |
Gene name: Avr1d | NCBI Gene ID: KC004057 | |
Entry name: AVH6_PHYSP | Protein name: RxLR effector protein Avh6 | |
DOI: 10.1094/MPMI-08-21-0201-R |
Gene/Protein information
Gene sequence:
ATGCGTCTCTCCAGCACCACCTTTGTTGTTCTTGCGGCCGTCCTCCTCGCAAGCGGCACTGCAGTATCGAAGGCCGACGAGACTGGCGTGACGAACGTAAACGCCGTTCACTCGCCGAATGTTCTCGCTGGCGTGGACAAGCGATTTCTCCGAAGCCACCACACGGAGGATGGCGAAGCCAAACTCTCCAACTACGACAATGAAGAGCGGAACGGCTTGTTCGGCGCGAACACTCTGTCAAATATGGGCAAGGATACGATTCTCCGCTTCCAGATGTTCACGAAATGGAAGGCCAATGGATACCTCCCGAAAAAAATCAAAGACGACATCCCCAGGAGTCTCTACAAGGCGTACAAAATCCACTACCGCATGAATTAG
Protein sequence:
MRLSSTTFVVLAAVLLASGTAVSKADETGVTNVNAVHSPNVLAGVDKRFLRSHHTEDGEAKLSNYDNEERNGLFGANTLSNMGKDTILRFQMFTKWKANGYLPKKIKDDIPRSLYKAYKIHYRMN
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Main properties of effector
Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
---|---|---|---|---|
13979 | 125 | 9.65 | -0.43 | 26 |
Plant infestation information
Experimental plant: | |
Susceptible plant: Glycine max | Disease name: Root and stem rot of soybean |
Host classification: Eudicots | NCBI Species: 3847 |
Pathogen-plant protein interaction
Uniprot ID | Protein name | Gene name | Species | Protein sequence |
---|
No Record found.
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG: psoj:PHYSODRAFT_354880
PRINTS: