Effector profile
| PlantPEAD ID: PlantPEAD00488 | Uniprot ID: D0U2C8 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 5507 | Pathogen type: Fungi |
| Species: Fusarium oxysporum | Strain: f. sp. lycopersici strain BFOL-51 | Other name: |
| Gene name: SIX6 | NCBI Gene ID: GQ268953 | |
| Entry name: D0U2C8_FUSOX | Protein name: Secreted in xylem 6 | |
| DOI: 10.1094/MPMI-11-13-0330-R | ||
Gene/Protein information
Gene sequence:
ATGAAGCTCGCTCTTATCGCATCAATCTTGGCTGCCGGCTGCGTAGCTGGTCCCCTTGCTCAAACCGAATCCGAATCTGCTGATGTGGCTGAGCACACCATCAATTATATTGACATCGCTCCAGAAGAGTTTGAACCACCGAAGGCGAATTTATCATCTTTGGTCTCTCGAGACACGCTTCCCGTCTCGACCTGTCCAGCCGGACAGAAATATGACCGCTCCGTCTGCTATAAAGCCGACAAGATTCGGAGCTTTTGCGTGGCGAACCCTCGCAGCAACCGGGAAAAGATTACCGACACCCCTTGCCAGCCGCGGGAGATTTGTGTACAGCGCAATCTCAGCAACGGGAAAAGCTTTGCCAAGTGCATTCCTATCGTTGACCTTGTAGAGTGGAAGACGAGCGCAAATGGGAACAAGGAAGGCTGCACCACGACCTCAGTCAACCCTGCAGGTTATCATCATCTGGGTACCATTGTGTATGACATTAACAAGAATCCTATTGAAGTTGATAAGATCAGCTACTTCGGCGAGCCTGGCAACGTGAATGAAGGTATTGGTGGATCGACATCGTACTTCAGCAGCGACAATTTCCAGTTCTCGAAAAGCCGATATATGAAAAGTAGGGACATGCGTACATTCATGACATGA
Protein sequence:
MKLALIASILAAGCVAGPLAQTESESADVAEHTINYIDIAPEEFEPPKANLSSLVSRDTLPVSTCPAGQKYDRSVCYKADKIRSFCVANPRSNREKITDTPCQPREICVQRNLSNGKSFAKCIPIVDLVEWKTSANGNKEGCTTTSVNPAGYHHLGTIVYDINKNPIEVDKISYFGEPGNVNEGIGGSTSYFSSDNFQFSKSRYMKSRDMRTFMT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 23577.6 | 215 | 6.81 | -0.398 | 31.69 |
Plant infestation information
| Experimental plant: Solanum lycopersicum (related: tomato) | |
| Susceptible plant: Solanum lycopersicum | Disease name: Fusarium wilt |
| Host classification: Eudicots | NCBI Species: 4081 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: