Effector profile
| PlantPEAD ID: PlantPEAD00500 | Uniprot ID: G0Y276 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 27337 | Pathogen type: Fungi |
| Species: Verticillium dahliae | Strain: | Other name: Verticillium wilt |
| Gene name: PevD1 | NCBI Gene ID: HQ540585 | |
| Entry name: PEVD1_VERDA | Protein name: Effector protein PevD1 | |
| DOI: 10.1007/s00299-013-1546-7 | ||
Gene/Protein information
Gene sequence:
ATGCAGTTCACCCTCGCCGCCGCCGCCGCCCTCTTTGGCGCCTCTGCCCTCGCGGCCCCCGCGTCTCCCGGCTCCACCGGTGCTCCTCCCGACCCCAACATGTACGAGAACATTGACATTGCCGACTTCAACGTCCGCAAGGGCGAGGACGGCACCATCAAGTACGTCAACTTCAAGCTGAGCGGCGACGACGCCGACGGCCTCCTCTGCGAGGCCCAGAACCCCGGCCTGCCTTCCAACGTCATCACCTGCGGCGAGTCCAAGTACCGCTTCGCCCTGTCCTCTGGTAAGCAGTATGAGTTCGCTCTGAGCCTGTACCACGAGCTCGGCCTTGCCGTCGGCTTCTACGGCACTGGCGAGATCTTCACCCACTGCCGTGCTGGCGGCCTTGGTGACTTTATCTGCCAGCAGCAGAACCCCACCACCATTGTCATCGACAGCCTGCCCGACGCTCCCGCCGAGGCTTAA
Protein sequence:
MQFTLAAAAALFGASALAAPASPGSTGAPPDPNMYENIDIADFNVRKGEDGTIKYVNFKLSGDDADGLLCEAQNPGLPSNVITCGESKYRFALSSGKQYEFALSLYHELGLAVGFYGTGEIFTHCRAGGLGDFICQQQNPTTIVIDSLPDAPAEA
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 16230.1 | 155 | 4.34 | -0.033 | 24.3 |
Plant infestation information
| Experimental plant: Gossypium hirsutum (related: cotton) | |
| Susceptible plant: Gossypium hirsutum, Lactuca sativa, Solanum lycopersicum | Disease name: Vascular wilt |
| Host classification: Eudicots | NCBI Species: 3635, 4236, 4081 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro: IPR032382
Pfam: PF16541
SMART:
KEGG:
PRINTS: