Effector profile
| PlantPEAD ID: PlantPEAD00504 | Uniprot ID: I2FS85 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 120017 | Pathogen type: Fungi |
| Species: Ustilago hordei | Strain: strain Uh4875-4 | Other name: Barley covered smut fungus |
| Gene name: UhAvr1 | NCBI Gene ID: CAGI01000148 | |
| Entry name: I2FS85_USTHO | Protein name: Conserved uncharacterized protein | |
| DOI: 10.3390/jof6030178 | ||
Gene/Protein information
Gene sequence:
ATGCGATCGTTTTCCCTTTTCCTCGTACTCTGCATATGGGTCATCGGCGTCATTGCACCTGGCGACAAAGCTTCTTCGTCTGCAGCTCCAGCTCAGCAACATCAACCCAGCTTTAAACTCGAGATAGCTGAAAACCCCAACGTTGATCCTTTCTTGGAAAAGATCTCAAAGCTGGGAAACAGTCATGATCTGTACCCACATGTTGCACTAATGCGTACGACCCTGTACGGCAAAGATAAACTGACCACTAACCTGGGAGCCTACCCAGATTTTCGACGGTTCATCTATCTTGGAAATAGCCCCGGGGTTCCCGAAATGTACTTTGCCGTTCCCCTTCATTTAAACCCTCATGGAGTAGACAGGAATCTTGCCTGGTCGCTGATTTACGCGCACAGCGATCAGCCTAAAACTTTGGTGCACCATGGATTCGTCTCCGCGAGCGGTGGACACCTGGTCCTAGATAAAGTTAAAAAAACTAATTACCCAAGTTCACGTTCTTTCGAGATTGGAGACGTTCTGACCCTCAGAGAGATACTTGATATTGAACTGCCTGCGCTCCGATTTGCCGGATGA
Protein sequence:
MRSFSLFLVLCIWVIGVIAPGDKASSSAAPAQQHQPSFKLEIAENPNVDPFLEKISKLGNSHDLYPHVALMRTTLYGKDKLTTNLGAYPDFRRFIYLGNSPGVPEMYFAVPLHLNPHGVDRNLAWSLIYAHSDQPKTLVHHGFVSASGGHLVLDKVKKTNYPSSRSFEIGDVLTLREILDIELPALRFAG
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 21080.3 | 190 | 7.92 | -0.049 | 37.99 |
Plant infestation information
| Experimental plant: Hordeum vulgare (related: barley) | |
| Susceptible plant: Hordeum vulgare | Disease name: Covered smut |
| Host classification: Monocots | NCBI Species: 4513 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|
No Record found.
External Links
Interpro:
Pfam:
SMART:
KEGG:
PRINTS: