Effector profile
| PlantPEAD ID: PlantPEAD00514 | Uniprot ID: A0A2L0WUE7 | Source: Article |
| Localization: Cytoplasmic(Exp) | Pathogen taxonomy ID: 187813 | Pathogen type: Oomycota |
| Species: Phytophthora brassicae | Strain: | Other name: |
| Gene name: RxLR24 | NCBI Gene ID: MG489826 | |
| Entry name: RLR24_PHYBB | Protein name: RxLR effector protein 24 | |
| DOI: 10.1111/tpj.13928 | ||
Gene/Protein information
Gene sequence:
ATGCGTTTGTTGATCTGGGTCCTGTTCGTGACTCTGGTCACCTTCGTTTCTAACACCACTGCTACCTCGACGTTCACCGACCCCCAGGTCACATCGGGTGATATCGAGGCTTTAACTCATTTACTTGATGTCGAAAGTAACGCTGACGCCAAGCGATTCCTGAGAACTGAAAGCAAGAACGATTTGAAAAGTGACGCTGACACAAATGGCATCGATATTGAAGACGAAGAAAGAGGCTTCATCCCGTCCTCGATAACAAATGCGTTCAGTAAGATGAAGACCGGGTGGTCCAACTTCAAATCGAACCAATTTGAGAAGGCATTCCAGCGCATGAATCAGAAGGGAGAGACGCCAACGACCCTAGCCAAGCGGTTGGATATCGGAAAAACAGCAGAAAAGCGATTTGAAAAGACCTACGAAAAGTATACTGCTTGGTGGATCAACCACCACACGAATGCTGGAACGTAA
Protein sequence:
MRLLIWVLFVTLVTFVSNTTATSTFTDPQVTSGDIEALTHLLDVESNADAKRFLRTESKNDLKSDADTNGIDIEDEERGFIPSSITNAFSKMKTGWSNFKSNQFEKAFQRMNQKGETPTTLAKRLDIGKTAEKRFEKTYEKYTAWWINHHTNAGT
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Main properties of effector
| Molecular weight | Sequence length | Theoretical pI | GRAVY | Instability index |
|---|---|---|---|---|
| 17648.8 | 155 | 6.31 | -0.614 | 19.37 |
Plant infestation information
| Experimental plant: Arabidopsis thaliana | |
| Susceptible plant: Arabidopsis thaliana | Disease name: NONE |
| Host classification: Eudicots | NCBI Species: 3702 |
Pathogen-plant protein interaction
| Uniprot ID | Protein name | Gene name | Species | Protein sequence |
|---|---|---|---|---|
|
P28185
|
Ras-related protein RABA1a
|
RABA1A
|
Arabidopsis thaliana (related: thale cress)
|
MAGYRADEEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGESADLPGKGETINVKEDGSVLKRMGCCSN
|
|
O04486
|
Ras-related protein RABA2a
|
RABA2A
|
Arabidopsis thaliana (related: thale cress)
|
MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQTIDVAATSESNAKKPCCSSS
|
|
Q9FJN8
|
Ras-related protein RABA4a
|
RABA4A
|
Arabidopsis thaliana (related: thale cress)
|
MTSGGGYGDPSQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQRAIPTEDAKEFAEKEGLFFLETSAFNATNVESAFSTVLTEIFNIVNKKSLAASEDQENGNPGSLAGKKIDIVPGPGQVIPNKSNMCCNS
|
|
Q39222
|
Ras-related protein RABA1b
|
RABA1B
|
Arabidopsis thaliana (related: thale cress)
|
MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKGEKIEVKNDVSALKKLGCCSN
|
|
O80860
|
ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
|
FTSH2
|
Arabidopsis thaliana (related: thale cress)
|
MAASSACLVGNGLSVNTTTKQRLSKHFSGRQTSFSSVIRTSKVNVVKASLDGKKKQEGRRDFLKILLGNAGVGLVASGKANADEQGVSSSRMSYSRFLEYLDKDRVNKVDLYENGTIAIVEAVSPELGNRVERVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSVLFNLIGNLAFPALLIGGLFLLSRRSGGGMGGPGGPGNPLQFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIVAGMEGTVMTDGKSKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQARGLTWFIPSDDPTLISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLARQMVTTFGMSDIGPWSLMDSSAQSDVIMRMMARNSMSEKLAEDIDSAVKKLSDSAYEIALSHIKNNREAMDKLVEVLLEKETIGGDEFRAILSEFTEIPPENRVPSSTTTTPASAPTPAAV
|
|
Q9LS94
|
Ras-related protein RABG3f
|
RABG3F
|
Arabidopsis thaliana (related: thale cress)
|
MPSRRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLIGNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSGEEEELYLPDTIDVGTSNQQRSTGCEC
|
|
Q96283
|
Ras-related protein RABA2c
|
RABA2C
|
Arabidopsis thaliana (related: thale cress)
|
MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTINVDDTSGGAKRACCSS
|
|
Q9M591
|
Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic
|
CRD1
|
Arabidopsis thaliana (related: thale cress)
|
MAAEMALVKPISKFSSPKLSNPSKFLSGRRFSTVIRMSASSSPPPPTTATSKSKKGTKKEIQESLLTPRFYTTDFEEMEQLFNTEINKNLNEAEFEALLQEFKTDYNQTHFVRNKEFKEAADKLQGPLRQIFVEFLERSCTAEFSGFLLYKELGRRLKKTNPVVAEIFSLMSRDEARHAGFLNKGLSDFNLALDLGFLTKARKYTFFKPKFIFYATYLSEKIGYWRYITIYRHLKENPEFQCYPIFKYFENWCQDENRHGDFFSALMKAQPQFLNDWQAKLWSRFFCLSVYVTMYLNDCQRTNFYEGIGLNTKEFDMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMVVSYEKLLAIGETDDASFIKTLKRIPLVTSLASEILAAYLMPPVESGSVDFAEFEPNLVY
|
|
Q9SN35
|
Ras-related protein RABA1d
|
RABA1D
|
Arabidopsis thaliana (related: thale cress)
|
MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGEDSGNVPSKGEKIDVDVSAVKKTGCCSN
|
|
Q9SMQ6
|
Ras-related protein RABA4b
|
RABA4B
|
Arabidopsis thaliana (related: thale cress)
|
MAGGGGYGGASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEGDSNNPGSLAGKKILIPGSGQEIPAKTSTCCTSS
|
|
Q9FK68
|
Ras-related protein RABA1c
|
RABA1C
|
Arabidopsis thaliana (related: thale cress)
|
MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPSKGDKIDIGKDVSAVKKGGCCSN
|
|
Q9FE79
|
Ras-related protein RABA4c
|
RABA4C
|
Arabidopsis thaliana (related: thale cress)
|
MSKFQSNFNQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKTDLGTLRAVPTEDAKEFAQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVSKKNLVANEEGESGGDSSLLQGTKIVVAGEETESKGKGCCGTS
|
|
Q9FIF9
|
Ras-related protein RABA2d
|
RABA2D
|
Arabidopsis thaliana (related: thale cress)
|
MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKKALAAQEAAAANSAIPGQGTTINVEDTSGAGKRGCCST
|
|
Q9FJH0
|
Ras-related protein RABA1f
|
RABA1F
|
Arabidopsis thaliana (related: thale cress)
|
MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDPAALPKGQTINVGSKDDVSAVKKVGCCSN
|
External Links
Interpro: IPR031825
Pfam: PF16810
SMART:
KEGG:
PRINTS: